CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSGALG00000019470
(
Gallus gallus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSGALG00000019470
T034532_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Msc
M01730_2.00
Mus musculus
NVCRKMYGBN
NVCRKMYGBN
PBM
Weirauch et al.(2014)
pTH5112
0.914
1.000
MSC
M02801_2.00
Homo sapiens
AACAGCTGTT
AACAGCTGTT
SELEX
Jolma et al.(2013)
MSC_1
0.914
1.000
MSC
M04183_2.00
Homo sapiens
NRMCAGMTGBYN
NRVCAKCTGKYN
SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_1
0.914
1.000
MSC
M04184_2.00
Homo sapiens
NRVCAYVTGBYN
NRVCABRTGBYN
SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_2
0.914
1.000
MSC
M04187_2.00
Homo sapiens
NRMCAGCTGBYV
BRVCAGCTGKYN
SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_1
0.914
1.000
MSC
M04188_2.00
Homo sapiens
BRMCATATGKYN
NRMCATATGKYV
SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_2
0.914
1.000
MSC
M04185_2.00
Homo sapiens
NRVCAGCTGBBN
NVVCAGCTGBYN
SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_1
0.914
1.000
MSC
M04186_2.00
Homo sapiens
BRMCATATGKYV
BRMCATATGKYV
SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_2
0.914
1.000
MSC
M04189_2.00
Homo sapiens
BRACAGCTGTYV
BRACAGCTGTYV
SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_1
0.914
1.000
MSC
M04190_2.00
Homo sapiens
BRMCATATGKYV
BRMCATATGKYV
SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_2
0.914
1.000
Tcf21
M01746_2.00
Mus musculus
RMCAKMTGK
MCAKMTGKY
PBM
Weirauch et al.(2014)
pTH5087
0.914
0.981
Tcf21
M02819_2.00
Mus musculus
VNAACAGCTGTTVN
NBAACAGCTGTTNB
SELEX
Jolma et al.(2013)
Tcf21_1
0.914
0.981
TCF21
M04092_2.00
Homo sapiens
BAACAGCTGBYN
NRVCAGCTGTTV
SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_1
0.914
0.981
TCF21
M04093_2.00
Homo sapiens
NRCCATATGKYV
BRMCATATGGYN
SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_2
0.914
0.981
TCF21
M04094_2.00
Homo sapiens
BAACAGCTGTYV
BRACAGCTGTTV
SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_1
0.914
0.981
TCF21
M04095_2.00
Homo sapiens
BACCATATGKYV
BRMCATATGGTV
SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_2
0.914
0.981
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGALP00000030247
bHLH
103
155
QRNAANARERARMRVLSKAFSRLKTSLPWVPPDTKLSKLDTLRLASSYIAHLR
Links
Other
bHLH
family TFs
Other
Gallus gallus
TFs
188 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL005378
Aedes aegypti
AAEL005378
N
AALB010677
Anopheles albimanus
AALB010677
N
AARA000113
Anopheles arabiensis
AARA000113
N
AATE001570
Anopheles atroparvus
AATE001570
N
ACEP26769
Atta cephalotes
ACEP26769
N
ACHR000033
Anopheles christyi
ACHR000033
N
ACUA017774
Anopheles culicifacies
ACUA017774
N
ADAC008315
Anopheles darlingi
ADAC008315
N
ADIR000099
Anopheles dirus
ADIR000099
N
AFAF020040
Anopheles farauti
AFAF020040
N
AFUN009566
Anopheles funestus
AFUN009566
N
AMAM021303
Anopheles maculatus
AMAM021303
N
AMEC020316
Anopheles melas
AMEC020316
N
AMEM016634
Anopheles merus
AMEM016634
N
AMIN008387
Anopheles minimus
AMIN008387
N
AQUA005076
Anopheles quadriannulatus
AQUA005076
N
ASIS023794
Anopheles sinensis
ASIS023794
N
ASTEI06814
Anopheles stephensi
ASTEI06814
N
Cflo_05575--XP_394941.3_APIME
Camponotus floridanus
Cflo_05575--XP_394941.3_APIME
N
CPIJ011193
Culex quinquefasciatus
CPIJ011193
N
CpipJ_CPIJ011193
Culex pipiens
CpipJ_CPIJ011193
N
GB41196
Apis mellifera
GB41196
N
MDOA002793
Musca domestica
MDOA002793
N
NV15492
Nasonia vitripennis
NV15492
N
SMAR006509
Strigamia maritima
SMAR006509
N