CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NEUROD2
(
Gorilla gorilla
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSGGOG00000000493
T034558_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NEUROD2
M02795_2.00
Homo sapiens
RVCATATGKY
RMCATATGBY
SELEX
Jolma et al.(2013)
NEUROD2_1
0.914
1.000
NEUROD2
M04160_2.00
Homo sapiens
RVCATATGKY
RMCATATGBY
SELEX
Yin et al.(2017)
NEUROD2_FL_HT-SELEX
0.914
1.000
NEUROD2
M08737_2.00
Homo sapiens
RRCAGMTGG
CCAKCTGYY
Misc
Kulakovskiy et al.(2013)
NDF2_HUMAN.H11MO.0.B
0.914
1.000
Neurod2
M08770_2.00
Mus musculus
RVCAGATGGB
VCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF2_MOUSE.H11MO.0.A
0.914
1.000
NEUROD2
M04161_2.00
Homo sapiens
RMCATATGBY
RVCATATGKY
SELEX
Yin et al.(2017)
NEUROD2_FL_Methyl-HT-SELEX
0.914
1.000
NEUROD1
M04148_2.00
Homo sapiens
RMCATATGKYVNNNTAWTT
AAWTANNNBRMCATATGKY
SELEX
Yin et al.(2017)
NEUROD1_FL_HT-SELEX
0.879
0.962
NEUROD1
M08057_2.00
Homo sapiens
NNVCAGATGGNNN
NNNCCATCTGBNN
ChIP-seq
Mathelier et al.(2014)
MA1109.1
0.879
0.962
NEUROD1
M08735_2.00
Homo sapiens
RVCAGATGGY
RCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF1_HUMAN.H11MO.0.A
0.879
0.962
Neurod1
M08764_2.00
Mus musculus
RVCAGATGGY
RCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF1_MOUSE.H11MO.0.A
0.879
0.962
Neurod1
M09474_2.00
Mus musculus
RVCAGATGGY
RCCATCTGBY
Misc
Heinz et al.(2010)
Islet-NeuroD1_GSE30298
0.879
0.962
NEUROD1
M09873_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NEUROD_01
0.879
0.962
NEUROD1
M09874_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NEUROD_02
0.879
0.962
NEUROD1
M04149_2.00
Homo sapiens
RVCATATGBYVYNBTAWTW
WAWTAVNRBRVCATATGBY
SELEX
Yin et al.(2017)
NEUROD1_FL_Methyl-HT-SELEX
0.879
0.962
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGGOP00000000485
bHLH
122
174
RRQKANARERNRMHDLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALS
ENSGGOP00000026327
bHLH
104
156
RRQKANARERNRMHDLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALS
Links
Other
bHLH
family TFs
Other
Gorilla gorilla
TFs
266 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACEP20954
Atta cephalotes
ACEP20954
I
Cflo_02744--XP_394233.3_APIME
Camponotus floridanus
Cflo_02744--XP_394233.3_APIME
I
Clk
Drosophila melanogaster
FBgn0023076
D
DAPPUDRAFT_346996
Daphnia pulex
DAPPUDRAFT_346996
I
GA20318
Drosophila pseudoobscura
FBgn0080313
I
GB48028
Apis mellifera
GB48028
I
GD13034
Drosophila simulans
FBgn0184756
I
GE20390
Drosophila yakuba
FBgn0237706
I
GF24152
Drosophila ananassae
FBgn0101146
I
GG14938
Drosophila erecta
FBgn0107192
I
GH16514
Drosophila grimshawi
FBgn0123985
I
GI12195
Drosophila mojavensis
FBgn0134952
I
GJ11427
Drosophila virilis
FBgn0198685
I
GK10694
Drosophila willistoni
FBgn0212707
I
GL17825
Drosophila persimilis
FBgn0155428
I
GM24989
Drosophila sechellia
FBgn0179850
I
HHAL003628-PA
Halyomorpha halys
HHAL003628-PA
I
HMEL008784
Heliconius melpomene
HMEL008784
I
Hsal_05831--XP_394233.3_APIME
Harpegnathos saltator
Hsal_05831--XP_394233.3_APIME
I
ISCW007040
Ixodes scapularis
ISCW007040
I
KGM_10878
Danaus plexippus
KGM_10878
I
LCUP014936
Lucilia cuprina
LCUP014936
I
LLOJ006614
Lutzomyia longipalpis
LLOJ006614
I
MCINX000525
Melitaea cinxia
MCINX000525
I
NV19013
Nasonia vitripennis
NV19013
I
PHUM426300
Pediculus humanus
PHUM426300
I
PPAI002844
Phlebotomus papatasi
PPAI002844
I
RPRC002110
Rhodnius prolixus
RPRC002110
I
TC000088
Tribolium castaneum
TC000088
I
YQE_03736
Dendroctonus ponderosae
YQE_03736
I