CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OLIG2
(
Gorilla gorilla
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSGGOG00000008780
T034602_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
OLIG2
M02812_2.00
Homo sapiens
AMCATATGBY
RVCATATGKT
SELEX
Jolma et al.(2013)
OLIG2_1
0.914
1.000
OLIG2
M02813_2.00
Homo sapiens
AMCATATGBY
RVCATATGKT
SELEX
Jolma et al.(2013)
OLIG2_2
0.914
1.000
OLIG2
M04223_2.00
Homo sapiens
AACAKMTGTB
VACAKMTGTT
SELEX
Yin et al.(2017)
OLIG2_eDBD_HT-SELEX_1
0.914
1.000
OLIG2
M04224_2.00
Homo sapiens
AMCATATGKY
RMCATATGKT
SELEX
Yin et al.(2017)
OLIG2_eDBD_HT-SELEX_2
0.914
1.000
OLIG2
M08742_2.00
Homo sapiens
NDNVHNRVVRVCAGMTGK
MCAKCTGBYBBYNDBNHN
Misc
Kulakovskiy et al.(2013)
OLIG2_HUMAN.H11MO.0.B
0.914
1.000
Olig2
M08771_2.00
Mus musculus
NDNVHNRVVRVCAGMTGK
MCAKCTGBYBBYNDBNHN
Misc
Kulakovskiy et al.(2013)
OLIG2_MOUSE.H11MO.0.A
0.914
1.000
Olig2
M09477_2.00
Mus musculus
RVCAKMTGKH
DMCAKMTGBY
Misc
Heinz et al.(2010)
Neuron-Olig2_GSE30882
0.914
1.000
OLIG2
M04225_2.00
Homo sapiens
AACAKMTGKB
VMCAKMTGTT
SELEX
Yin et al.(2017)
OLIG2_eDBD_Methyl-HT-SELEX_1
0.914
1.000
OLIG2
M04226_2.00
Homo sapiens
AMCATATGKT
AMCATATGKT
SELEX
Yin et al.(2017)
OLIG2_eDBD_Methyl-HT-SELEX_2
0.914
1.000
Olig3
M01745_2.00
Mus musculus
NWAHHATANNN
NNNTATDDTWN
PBM
Weirauch et al.(2014)
pTH5164
0.894
0.964
OLIG3
M02798_2.00
Homo sapiens
AMCATATGBY
RVCATATGKT
SELEX
Jolma et al.(2013)
OLIG3_1
0.894
0.964
OLIG3
M04175_2.00
Homo sapiens
RMCATATGSY
RSCATATGKY
SELEX
Yin et al.(2017)
OLIG3_FL_HT-SELEX
0.894
0.964
OLIG3
M04171_2.00
Homo sapiens
RMCATATGSY
RSCATATGKY
SELEX
Yin et al.(2017)
OLIG3_eDBD_HT-SELEX_1
0.894
0.964
OLIG3
M04172_2.00
Homo sapiens
AACAKMTGBT
AVCAKMTGTT
SELEX
Yin et al.(2017)
OLIG3_eDBD_HT-SELEX_2
0.894
0.964
OLIG3
M04176_2.00
Homo sapiens
RMCATATGGY
RCCATATGKY
SELEX
Yin et al.(2017)
OLIG3_FL_Methyl-HT-SELEX
0.894
0.964
OLIG3
M04173_2.00
Homo sapiens
RMCATATGSY
RSCATATGKY
SELEX
Yin et al.(2017)
OLIG3_eDBD_Methyl-HT-SELEX_1
0.894
0.964
OLIG3
M04174_2.00
Homo sapiens
VACAKMTGKY
RMCAKMTGTB
SELEX
Yin et al.(2017)
OLIG3_eDBD_Methyl-HT-SELEX_2
0.894
0.964
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGGOP00000008581
bHLH
109
163
LRLKINSRERKRMHDLNIAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLT
Links
Other
bHLH
family TFs
Other
Gorilla gorilla
TFs
110 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30131.m007145
Ricinus communis
30131.m007145
N
0.000
Al_scaffold_0007_76
Arabidopsis lyrata
Al_scaffold_0007_76
I
0.000
Aquca_006_00159
Aquilegia coerulea
Aquca_006_00159
I
0.000
AT4G38900
Arabidopsis thaliana
AT4G38900
I
0.000
BGIOSGA011761
Oryza indica
BGIOSGA011761
N
0.000
BGIOSGA029105
Oryza indica
BGIOSGA029105
I
0.000
BGIOSGA029106
Oryza indica
BGIOSGA029106
I
0.000
Bo3g149620
Brassica oleracea
Bo3g149620
I
0.000
Bo5g007170
Brassica oleracea
Bo5g007170
I
0.000
Bo7g119550
Brassica oleracea
Bo7g119550
I
0.000
Bostr.25542s0069
Boechera stricta
Bostr.25542s0069
I
0.000
Bra010722
Brassica rapa
Bra010722
I
0.000
Bra015471
Brassica rapa
Bra015471
I
0.000
Bra030637
Brassica rapa
Bra030637
I
0.000
Bra033582
Brassica rapa
Bra033582
I
0.000
BRADI1G76690
Brachypodium distachyon
BRADI1G76690
N
0.000
BRADI3G41980
Brachypodium distachyon
BRADI3G41980
I
0.000
BRADI5G14497
Brachypodium distachyon
BRADI5G14497
I
0.000
Cagra.1383s0070
Capsella grandiflora
Cagra.1383s0070
N
0.000
Carubv10004500m.g
Capsella rubella
Carubv10004500m.g
N
0.000
cassava30160.valid.m1
Manihot esculenta
cassava30160.valid.m1
I
0.000
cassava38273.valid.m1
Manihot esculenta
cassava38273.valid.m1
I
0.000
Ca_10755
Cicer arietinum
Ca_10755
N
0.000
Ca_27693
Cicer arietinum
Ca_27693
I
0.000
Ciclev10028062m.g
Citrus clementina
Ciclev10028062m.g
I
0.000
Cla016124
Citrullus lanatus
Cla016124
I
0.000
Cla016125
Citrullus lanatus
Cla016125
I
0.000
Cucsa.382180
Cucumis sativus
Cucsa.382180
I
0.000
Cucsa.382190
Cucumis sativus
Cucsa.382190
I
0.000
estExt_gwp_gw1.C_200078
Physcomitrella patens
estExt_gwp_gw1.C_200078
I
0.000
estExt_gwp_gw1.C_5120003
Physcomitrella patens
estExt_gwp_gw1.C_5120003
I
0.000
Eucgr.D00737
Eucalyptus grandis
Eucgr.D00737
I
0.000
Eucgr.I01335
Eucalyptus grandis
Eucgr.I01335
I
0.000
evm.TU.supercontig_150.7
Carica papaya
evm.TU.supercontig_150.7
I
0.000
evm.TU.supercontig_81.160
Carica papaya
evm.TU.supercontig_81.160
I
0.000
e_gw1.20.99.1
Physcomitrella patens
e_gw1.20.99.1
I
0.000
F775_32059
Aegilops tauschii
F775_32059
I
0.000
gene01680-v1.0-hybrid
Fragaria vesca
gene01680-v1.0-hybrid
I
0.000
GLYMA04G02850
Glycine max
GLYMA04G02850
I
0.000
GLYMA11G11791
Glycine max
GLYMA11G11791
I
0.000
GLYMA12G04050
Glycine max
GLYMA12G04050
I
0.000
Gorai.001G243800
Gossypium raimondii
Gorai.001G243800
I
0.000
Gorai.005G248900
Gossypium raimondii
Gorai.005G248900
I
0.000
GRMZM2G428184
Zea mays
GRMZM2G428184
N
0.000
GRMZM2G473274
Zea mays
GRMZM2G473274
N
0.000
GSMUA_Achr11G14990_001
Musa acuminata
GSMUA_Achr11G14990_001
I
0.000
GSMUA_Achr3G12290_001
Musa acuminata
GSMUA_Achr3G12290_001
I
0.000
GSMUA_Achr5G20200_001
Musa acuminata
GSMUA_Achr5G20200_001
N
0.000
GSMUA_Achr5G25700_001
Musa acuminata
GSMUA_Achr5G25700_001
I
0.000
GSMUA_AchrUn_randomG00680_001
Musa acuminata
GSMUA_AchrUn_randomG00680_001
I
0.000
gw1.20.225.1
Physcomitrella patens
gw1.20.225.1
I
0.000
LPERR03G02000
Leersia perrieri
LPERR03G02000
N
0.000
LPERR04G13880
Leersia perrieri
LPERR04G13880
N
0.000
Lus10018061.g
Linum usitatissimum
Lus10018061.g
I
0.000
Lus10042057.g
Linum usitatissimum
Lus10042057.g
I
0.000
mgf000302m
Mimulus guttatus
mgf000302m
I
0.000
mgf004912m
Mimulus guttatus
mgf004912m
I
0.000
MLOC_10725
Hordeum vulgare
MLOC_10725
N
0.000
MLOC_64362
Hordeum vulgare
MLOC_64362
I
0.000
MLOC_64781
Hordeum vulgare
MLOC_64781
I
0.000
MLOC_75510
Hordeum vulgare
MLOC_75510
I
0.000
MTR_4g072090
Medicago truncatula
MTR_4g072090
I
0.000
OB03G12130
Oryza brachyantha
OB03G12130
N
0.000
OB09G23080
Oryza brachyantha
OB09G23080
I
0.000
OBART03G02190
Oryza barthii
OBART03G02190
N
0.000
OGLUM03G02140
Oryza glumaepatula
OGLUM03G02140
N
0.000
OGLUM09G17020
Oryza glumaepatula
OGLUM09G17020
I
0.000
OLONG_011520
Oryza longistaminata
OLONG_011520
N
0.000
OMERI03G02030
Oryza meridionalis
OMERI03G02030
N
0.000
OMERI09G12160
Oryza meridionalis
OMERI09G12160
I
0.000
ONIVA03G01800
Oryza nivara
ONIVA03G01800
N
0.000
OPUNC03G01930
Oryza punctata
OPUNC03G01930
N
0.000
orange1.1g007579m.g
Citrus sinensis
orange1.1g007579m.g
I
0.000
ORGLA03G0019600
Oryza glaberrima
ORGLA03G0019600
N
0.000
ORUFI03G01930
Oryza rufipogon
ORUFI03G01930
N
0.000
OS03G0127500
Oryza sativa
OS03G0127500
N
0.000
Pavir.J19159
Panicum virgatum
Pavir.J19159
N
0.000
Pavir.J29906
Panicum virgatum
Pavir.J29906
N
0.000
PDK_20s1312701g003
Phoenix dactylifera
PDK_20s1312701g003
I
0.000
PGSC0003DMG400001659
Solanum tuberosum
PGSC0003DMG400001659
I
0.000
PK00843.1
Cannabis sativa
PK00843.1
I
0.000
POPTR_0004s17080
Populus trichocarpa
POPTR_0004s17080
I
0.000
POPTR_0009s12830
Populus trichocarpa
POPTR_0009s12830
I
0.000
RF2A
Oryza sativa
OS09G0516200
I
0.000
SapurV1A.0091s0130
Salix purpurea
SapurV1A.0091s0130
I
0.000
SapurV1A.0379s0290
Salix purpurea
SapurV1A.0379s0290
I
0.000
Sb01g048710
Sorghum bicolor
Sb01g048710
N
0.000
Sb06g021350
Sorghum bicolor
Sb06g021350
I
0.000
SELMODRAFT_129846
Selaginella moellendorffii
SELMODRAFT_129846
I
0.000
SELMODRAFT_34663
Selaginella moellendorffii
SELMODRAFT_34663
I
0.000
SELMODRAFT_77868
Selaginella moellendorffii
SELMODRAFT_77868
I
0.000
Si035841m.g
Setaria italica
Si035841m.g
N
0.000
Solyc01g110480.2
Solanum lycopersicum
Solyc01g110480.2
I
0.000
Solyc06g053350.2
Solanum lycopersicum
Solyc06g053350.2
I
0.000
TCM_006766
Theobroma cacao
TCM_006766
I
0.000
TCM_034172
Theobroma cacao
TCM_034172
N
0.000
Thhalv10024895m.g
Eutrema salsugineum
Thhalv10024895m.g
I
0.000
Traes_2AL_FA1957F59
Triticum aestivum
Traes_2AL_FA1957F59
I
0.000
Traes_7BS_7B68879A9
Triticum aestivum
Traes_7BS_7B68879A9
I
0.000
Traes_7DS_3463CAE33
Triticum aestivum
Traes_7DS_3463CAE33
I
0.000
TRIUR3_31242
Triticum urartu
TRIUR3_31242
I
0.000
VIT_03s0038g00860
Vitis vinifera
VIT_03s0038g00860
I
0.000