ENSLACG00000014348 (Latimeria chalumnae)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSLACG00000014348 T034853_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Msc
M01730_2.00 		Mus musculus
NVCRKMYGBN
NVCRKMYGBN		 PBM
Weirauch et al.(2014)
pTH5112 		0.894 0.981
MSC
M02801_2.00 		Homo sapiens
AACAGCTGTT
AACAGCTGTT		 SELEX
Jolma et al.(2013)
MSC_1 		0.894 0.981
MSC
M04183_2.00 		Homo sapiens
NRMCAGMTGBYN
NRVCAKCTGKYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_1 		0.894 0.981
MSC
M04184_2.00 		Homo sapiens
NRVCAYVTGBYN
NRVCABRTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_2 		0.894 0.981
MSC
M04187_2.00 		Homo sapiens
NRMCAGCTGBYV
BRVCAGCTGKYN		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_1 		0.894 0.981
MSC
M04188_2.00 		Homo sapiens
BRMCATATGKYN
NRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_2 		0.894 0.981
MSC
M04185_2.00 		Homo sapiens
NRVCAGCTGBBN
NVVCAGCTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_1 		0.894 0.981
MSC
M04186_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_2 		0.894 0.981
MSC
M04189_2.00 		Homo sapiens
BRACAGCTGTYV
BRACAGCTGTYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_1 		0.894 0.981
MSC
M04190_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_2 		0.894 0.981
Tcf21
M01746_2.00 		Mus musculus
RMCAKMTGK
MCAKMTGKY		 PBM
Weirauch et al.(2014)
pTH5087 		0.894 0.962
Tcf21
M02819_2.00 		Mus musculus
VNAACAGCTGTTVN
NBAACAGCTGTTNB		 SELEX
Jolma et al.(2013)
Tcf21_1 		0.894 0.962
TCF21
M04092_2.00 		Homo sapiens
BAACAGCTGBYN
NRVCAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_1 		0.894 0.962
TCF21
M04093_2.00 		Homo sapiens
NRCCATATGKYV
BRMCATATGGYN		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_2 		0.894 0.962
TCF21
M04094_2.00 		Homo sapiens
BAACAGCTGTYV
BRACAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_1 		0.894 0.962
TCF21
M04095_2.00 		Homo sapiens
BACCATATGKYV
BRMCATATGGTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_2 		0.894 0.962
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000016286 bHLH 79 131

Links

Other bHLH family TFs
Other Latimeria chalumnae TFs

158 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
16040_YML099C Saccharomyces mikatae 16040_YML099C I 0.000
17710_YML099C Saccharomyces paradoxus 17710_YML099C I 0.000
18194_YML099C Saccharomyces bayanus 18194_YML099C I 0.000
AACERI_AaceriAAL175W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAAL175W I 0.000
AGOS_AAL175W Ashbya gossypii AGOS_AAL175W I 0.000
ARG81 Saccharomyces cerevisiae YML099C D 0.000
CIMG_02802 Coccidioides immitis CIMG_02802 N 0.000
CORT_0E00270 Candida orthopsilosis CORT_0E00270 I 0.000
CPAG_00315 Candida parapsilosis CPAG_00315 I 0.000
CPC735_036320 Coccidioides posadasii CPC735_036320 N 0.000
Ecym_8159 Eremothecium cymbalariae Ecym_8159 I 0.000
GNLVRS01_PISO0M20692g Millerozyma farinosa GNLVRS01_PISO0M20692g I 0.000
GNLVRS01_PISO0N20935g Millerozyma farinosa GNLVRS01_PISO0N20935g I 0.000
KAFR_0L02130 Kazachstania africana KAFR_0L02130 I 0.000
KLLA0_D10197g Kluyveromyces lactis KLLA0_D10197g I 0.000
KLTH0E16500g Lachancea thermotolerans KLTH0E16500g I 0.000
KLTH0E16500g Kluyveromyces thermotolerans KLTH0E16500g I 0.000
KNAG_0J00210 Kazachstania naganishii KNAG_0J00210 I 0.000
Kpol_538p52 Vanderwaltozyma polyspora Kpol_538p52 I 0.000
Kwal_9688 Kluyveromyces waltii Kwal_9688 I 0.000
NCAS_0C00220 Naumovozyma castellii NCAS_0C00220 I 0.000
NDAI_0K00150 Naumovozyma dairenensis NDAI_0K00150 I 0.000
PGUG_03209 Meyerozyma guilliermondii PGUG_03209 I 0.000
PGUG_03209 Candida guilliermondii PGUG_03209 I 0.000
SAKL0D00264g Lachancea kluyveri SAKL0D00264g I 0.000
Scas_Contig626.6 Saccharomyces castellii Scas_Contig626.6 I 0.000
SKUD_195006 Saccharomyces kudriavzevii SKUD_195006 I 0.000
SU7_2431 Saccharomyces arboricola SU7_2431 I 0.000
TDEL_0B00480 Torulaspora delbrueckii TDEL_0B00480 I 0.000
ZBAI_03002 Zygosaccharomyces bailii ZBAI_03002 I 0.000
ZBAI_08687 Zygosaccharomyces bailii ZBAI_08687 I 0.000
ZYRO0A00440g Zygosaccharomyces rouxii ZYRO0A00440g I 0.000