CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSLACG00000017438
(
Latimeria chalumnae
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSLACG00000017438
T034876_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Mxi1
M08754_2.00
Mus musculus
VCACGTGBSNBBNNV
BNNVVNSVCACGTGB
Misc
Kulakovskiy et al.(2013)
MXI1_MOUSE.H11MO.0.A
0.860
0.808
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLACP00000019832
bHLH
59
111
SRSTHNEMEKNRRAHLRLCLEKLKMLIPLGPESNRHTTLSLLTKAKLHIKKLE
ENSLACP00000019833
bHLH
60
112
SRSTHNEMEKNRRAHLRLCLEKLKMLIPLGPESNRHTTLSLLTKAKLHIKKLE
Links
Other
bHLH
family TFs
Other
Latimeria chalumnae
TFs
129 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACOC_0001033601
Angiostrongylus costaricensis
ACOC_0001033601
N
ANCCEY_04345
Ancylostoma ceylanicum
ANCCEY_04345
N
ANCDUO_25873
Ancylostoma duodenale
ANCDUO_25873
N
HCOI01069100
Haemonchus contortus
HCOI01069100
N
HCOI01070700
Haemonchus contortus
HCOI01070700
N
HCOI02188500
Haemonchus contortus
HCOI02188500
N
HPLM_0001019601
Haemonchus placei
HPLM_0001019601
N
maker-nMf.1.1.scaf00590-augustus-gene-0.15
Meloidogyne floridensis
maker-nMf.1.1.scaf00590-augustus-gene-0.15
N
MhA1_Contig527.frz3.gene2
Meloidogyne hapla
MhA1_Contig527.frz3.gene2
N
Minc15006
Meloidogyne incognita
Minc15006
N
NBR_0001469201
Nippostrongylus brasiliensis
NBR_0001469201
N
NECAME_04309
Necator americanus
NECAME_04309
N
SVUK_0000158201
Strongylus vulgaris
SVUK_0000158201
N