ARNTL (Loxodonta africana)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSLAFG00000026673 T034965_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arntl
M01751_2.00 		Mus musculus
NCACGTGAYN
NRTCACGTGN		 PBM
Weirauch et al.(2014)
pTH5064 		0.914 1.000
ARNTL
M02787_2.00 		Homo sapiens
GTCACGTGAC
GTCACGTGAC		 SELEX
Jolma et al.(2013)
ARNTL_1 		0.914 1.000
ARNTL
M04124_2.00 		Homo sapiens
RDCACGTGHN
NDCACGTGHY		 SELEX
Yin et al.(2017)
ARNTL_eDBD_HT-SELEX 		0.914 1.000
ARNTL
M08725_2.00 		Homo sapiens
NVDCACGTGBN
NVCACGTGHBN		 Misc
Kulakovskiy et al.(2013)
BMAL1_HUMAN.H11MO.0.A 		0.914 1.000
Arntl
M08776_2.00 		Mus musculus
VCACGTGMN
NKCACGTGB		 Misc
Kulakovskiy et al.(2013)
BMAL1_MOUSE.H11MO.0.A 		0.914 1.000
Arntl
M09478_2.00 		Mus musculus
CACGTGNN
NNCACGTG		 Misc
Heinz et al.(2010)
Liver-Bmal1_GSE39860 		0.914 1.000
Arntl
M09889_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BMAL1_01 		0.914 1.000
ARNTL
M09841_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BMAL1_Q6 		0.914 1.000
ARNTL
M04125_2.00 		Homo sapiens
NDCACRTGHY
RDCAYGTGHN		 SELEX
Yin et al.(2017)
ARNTL_eDBD_Methyl-HT-SELEX 		0.914 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000019736 bHLH 80 133
ENSLAFP00000029372 bHLH 73 126

Links

Other bHLH family TFs
Other Loxodonta africana TFs

89 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HCBG_05889 Histoplasma capsulatum HCBG_05889 N 0.000
HMPREF1541_05522 Cyphellophora europaea HMPREF1541_05522 N 0.000
LEMA_P109100.1 Leptosphaeria maculans LEMA_P109100.1 N 0.000
Pc13g06530 Penicillium chrysogenum Pc13g06530 N 0.000
PCH_Pc13g06530 Penicillium rubens PCH_Pc13g06530 N 0.000
PEX1_099950 Penicillium expansum PEX1_099950 N 0.000
PITC_065540 Penicillium italicum PITC_065540 N 0.000
PV11_05636 Exophiala sideris PV11_05636 N 0.000
SS1G_02054 Sclerotinia sclerotiorum SS1G_02054 N 0.000
TRIVIDRAFT_149245 Trichoderma virens TRIVIDRAFT_149245 N 0.000
TRIVIDRAFT_189391 Trichoderma virens TRIVIDRAFT_189391 N 0.000
U727_00430311331 Penicillium solitum U727_00430311331 N 0.000
V499_04467 Pseudogymnoascus pannorum V499_04467 N 0.000
V499_06431 Pseudogymnoascus pannorum V499_06431 N 0.000