USF1 (Microcebus murinus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSMICG00000007199 T035255_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Usf1
M01732_2.00 		Mus musculus
NRYCACGTGNN
NNCACGTGRYN		 PBM
Weirauch et al.(2014)
pTH4376 		0.914 1.000
USF1
M02792_2.00 		Homo sapiens
RNCACGTGRY
RYCACGTGNY		 SELEX
Jolma et al.(2013)
USF1_1 		0.914 1.000
USF1
M04146_2.00 		Homo sapiens
NVCACGTGVCN
NGBCACGTGBN		 SELEX
Yin et al.(2017)
USF1_FL_HT-SELEX 		0.914 1.000
USF1
M08056_2.00 		Homo sapiens
RGTCACRTGVB
VBCAYGTGACY		 ChIP-seq
Mathelier et al.(2014)
MA0093.2 		0.914 1.000
USF1
M07807_2.00 		Homo sapiens
VGTCACGTGRBSVVV
BBBSVYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
A549_USF1_HudsonAlpha 		0.914 1.000
USF1
M07808_2.00 		Homo sapiens
VVGTCACGTGVBSVS
SBSVBCACGTGACBB		 ChIP-seq
Gerstein et al.(2012)
GM12878_USF1_HudsonAlpha 		0.914 1.000
USF1
M07809_2.00 		Homo sapiens
RGTCACGTGVBSVNN
NNBSVBCACGTGACY		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_USF1_HudsonAlpha 		0.914 1.000
USF1
M07810_2.00 		Homo sapiens
VGTCACGTGRB
VYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
HepG2_USF1_HudsonAlpha 		0.914 1.000
USF1
M07811_2.00 		Homo sapiens
NVGTCACGTGVSSV
BSSBCACGTGACBN		 ChIP-seq
Gerstein et al.(2012)
K562_USF1_HudsonAlpha 		0.914 1.000
USF1
M08733_2.00 		Homo sapiens
VGTCACGTGVBS
SVBCACGTGACB		 Misc
Kulakovskiy et al.(2013)
USF1_HUMAN.H11MO.0.A 		0.914 1.000
Usf1
M08756_2.00 		Mus musculus
NNGTCACGTGVBS
SVBCACGTGACNN		 Misc
Kulakovskiy et al.(2013)
USF1_MOUSE.H11MO.0.A 		0.914 1.000
USF1
M09460_2.00 		Homo sapiens
YCACGTGRBN
NVYCACGTGR		 Misc
Heinz et al.(2010)
GM12878-Usf1_GSE32465 		0.914 1.000
USF1
M09867_2.00 		Homo sapiens
NNRYCACGTGRYNN
NNRYCACGTGRYNN		 Transfac
Matys et al.(2006)
V$USF_01 		0.914 1.000
USF1
M09868_2.00 		Homo sapiens
NNRNCAYRTGNYNN
NNRNCAYRTGNYNN		 Transfac
Matys et al.(2006)
V$USF_02 		0.914 1.000
USF1
M09869_2.00 		Homo sapiens
HCACGTGH
DCACGTGD		 Transfac
Matys et al.(2006)
V$USF_C 		0.914 1.000
USF1
M04147_2.00 		Homo sapiens
VHCAYGTGAYN
NRTCACRTGDB		 SELEX
Yin et al.(2017)
USF1_FL_Methyl-HT-SELEX 		0.914 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMICP00000006557 bHLH 200 255

Links

Other bHLH family TFs
Other Microcebus murinus TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000017607 Ailuropoda melanoleuca ENSAMEG00000017607 I
ENSCSAG00000008915 Chlorocebus sabaeus ENSCSAG00000008915 I
ENSMEUG00000013090 Macropus eugenii ENSMEUG00000013090 I
ENSMMUP00000000850 Macaca fascicularis ENSMMUP00000000850 I
ENSMPUG00000001221 Mustela putorius furo ENSMPUG00000001221 I
ENSNLEG00000004326 Nomascus leucogenys ENSNLEG00000004326 I
ENSOARG00000008239 Ovis aries ENSOARG00000008239 I
ENSP00000391200-D1 Bos grunniens ENSP00000391200-D1 I
ENSPPYG00000000002 Pongo abelii ENSPPYG00000000002 I
ENSSHAG00000005493 Sarcophilus harrisii ENSSHAG00000005493 I
ENSSTOG00000023210 Ictidomys tridecemlineatus ENSSTOG00000023210 I
Myotis_brandtii_ZNF692_10016142 Myotis brandtii Myotis_brandtii_ZNF692_10016142 I
Zfp692 Mus musculus ENSMUSG00000037243 I
Zfp692 Rattus norvegicus ENSRNOG00000002682 I
ZNF692 Pan troglodytes ENSPTRG00000002226 I
ZNF692 Bos taurus ENSBTAG00000021115 I
ZNF692 Canis familiaris ENSCAFG00000003155 I
ZNF692 Callithrix jacchus ENSCJAG00000018739 I
ZNF692 Tursiops truncatus ENSTTRG00000013805 I
ZNF692 Cavia porcellus ENSCPOG00000022134 I
ZNF692 Sus scrofa ENSSSCG00000030672 I
ZNF692 Dasypus novemcinctus ENSDNOG00000011720 I
ZNF692 Erinaceus europaeus ENSEEUG00000000422 I
ZNF692 Pteropus vampyrus ENSPVAG00000004179 I
ZNF692 Monodelphis domestica ENSMODG00000009168 I
ZNF692 Felis catus ENSFCAG00000000130 I
ZNF692 Ochotona princeps ENSOPRG00000011333 I
ZNF692 Otolemur garnettii ENSOGAG00000004267 I
ZNF692 Oryctolagus cuniculus ENSOCUG00000021004 I
ZNF692 Homo sapiens ENSG00000171163 D
ZNF692 Gorilla gorilla ENSGGOG00000009088 I
ZNF692 Myotis lucifugus ENSMLUG00000002398 I
ZNF692 Macaca mulatta ENSMMUG00000000634 I