CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NEUROD1
(
Myotis lucifugus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSMLUG00000025259
T035359_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NEUROD1
M04148_2.00
Homo sapiens
RMCATATGKYVNNNTAWTT
AAWTANNNBRMCATATGKY
SELEX
Yin et al.(2017)
NEUROD1_FL_HT-SELEX
0.914
1.000
NEUROD1
M08057_2.00
Homo sapiens
NNVCAGATGGNNN
NNNCCATCTGBNN
ChIP-seq
Mathelier et al.(2014)
MA1109.1
0.914
1.000
NEUROD1
M08735_2.00
Homo sapiens
RVCAGATGGY
RCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF1_HUMAN.H11MO.0.A
0.914
1.000
Neurod1
M08764_2.00
Mus musculus
RVCAGATGGY
RCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF1_MOUSE.H11MO.0.A
0.914
1.000
Neurod1
M09474_2.00
Mus musculus
RVCAGATGGY
RCCATCTGBY
Misc
Heinz et al.(2010)
Islet-NeuroD1_GSE30298
0.914
1.000
NEUROD1
M09873_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NEUROD_01
0.914
1.000
NEUROD1
M09874_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NEUROD_02
0.914
1.000
NEUROD1
M04149_2.00
Homo sapiens
RVCATATGBYVYNBTAWTW
WAWTAVNRBRVCATATGBY
SELEX
Yin et al.(2017)
NEUROD1_FL_Methyl-HT-SELEX
0.914
1.000
NEUROD2
M02795_2.00
Homo sapiens
RVCATATGKY
RMCATATGBY
SELEX
Jolma et al.(2013)
NEUROD2_1
0.879
0.962
NEUROD2
M04160_2.00
Homo sapiens
RVCATATGKY
RMCATATGBY
SELEX
Yin et al.(2017)
NEUROD2_FL_HT-SELEX
0.879
0.962
NEUROD2
M08737_2.00
Homo sapiens
RRCAGMTGG
CCAKCTGYY
Misc
Kulakovskiy et al.(2013)
NDF2_HUMAN.H11MO.0.B
0.879
0.962
Neurod2
M08770_2.00
Mus musculus
RVCAGATGGB
VCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF2_MOUSE.H11MO.0.A
0.879
0.962
NEUROD2
M04161_2.00
Homo sapiens
RMCATATGBY
RVCATATGKY
SELEX
Yin et al.(2017)
NEUROD2_FL_Methyl-HT-SELEX
0.879
0.962
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMLUP00000020920
bHLH
102
154
RRMKANARERNRMHGLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALS
Links
Other
bHLH
family TFs
Other
Myotis lucifugus
TFs
269 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACOC_0001241401
Angiostrongylus costaricensis
ACOC_0001241401
I
ALUE_0000326401
Ascaris lumbricoides
ALUE_0000326401
I
ANCCAN_03294
Ancylostoma caninum
ANCCAN_03294
I
ANCCEY_09166
Ancylostoma ceylanicum
ANCCEY_09166
I
ASIM_0000214101
Anisakis simplex
ASIM_0000214101
I
ASIM_0001335601
Anisakis simplex
ASIM_0001335601
I
ASU_05094
Ascaris suum
ASU_05094
I
BGLB003270
Biomphalaria glabrata
BGLB003270
I
BGLB009720
Biomphalaria glabrata
BGLB009720
I
Bm3413
Brugia malayi
Bm3413
I
Bm7588
Brugia malayi
Bm7588
I
BTMF_0000617301
Brugia timori
BTMF_0000617301
I
BTMF_0000787301
Brugia timori
BTMF_0000787301
I
CBN32559
Caenorhabditis brenneri
CBN32559
I
ces-2
Caenorhabditis elegans
WBGene00000469
D
CJA10655
Caenorhabditis japonica
CJA10655
I
CRE13954
Caenorhabditis remanei
CRE13954
I
DICVIV_06567
Dictyocaulus viviparus
DICVIV_06567
I
DME_0000215901
Dracunculus medinensis
DME_0000215901
I
EEL_0000071901
Elaeophora elaphi
EEL_0000071901
I
EEL_0000232301
Elaeophora elaphi
EEL_0000232301
I
EVEC_0000550601
Enterobius vermicularis
EVEC_0000550601
I
GPUH_0000579801
Gongylonema pulchrum
GPUH_0000579801
I
Hba_18554
Heterorhabditis bacteriophora
Hba_18554
I
HCOI01537900
Haemonchus contortus
HCOI01537900
I
HPLM_0000323401
Haemonchus placei
HPLM_0000323401
I
HPLM_0000755401
Haemonchus placei
HPLM_0000755401
I
ISCW006531
Ixodes scapularis
ISCW006531
I
L596_g3194
Steinernema carpocapsae
L596_g3194
I
L889_g9945
Steinernema feltiae
L889_g9945
I
L893_g26459
Steinernema glaseri
L893_g26459
I
L898_g30246
Steinernema monticolum
L898_g30246
I
LOAG_04491
Loa loa
LOAG_04491
I
nAv.1.0.1.g04605
Acanthocheilonema viteae
nAv.1.0.1.g04605
I
nAv.1.0.1.g06570
Acanthocheilonema viteae
nAv.1.0.1.g06570
I
nDi.2.2.2.g01315
Dirofilaria immitis
nDi.2.2.2.g01315
I
nDi.2.2.2.g04619
Dirofilaria immitis
nDi.2.2.2.g04619
I
nDi.2.2.2.g10294
Dirofilaria immitis
nDi.2.2.2.g10294
I
nLs.2.1.2.g06633
Litomosoides sigmodontis
nLs.2.1.2.g06633
I
nOo.2.0.1.g09202
Onchocerca ochengi
nOo.2.0.1.g09202
I
OFLC_0001455401
Onchocerca flexuosa
OFLC_0001455401
I
PEQ_0001019701
Parascaris equorum
PEQ_0001019701
I
PTRK_0001316500
Parastrongyloides trichosuri
PTRK_0001316500
I
SMAR014806
Strigamia maritima
SMAR014806
I
SMUV_0001027601
Syphacia muris
SMUV_0001027601
I
SPAL_0001536200
Strongyloides papillosus
SPAL_0001536200
I
SPU_021150
Strongylocentrotus purpuratus
SPU_021150
I
SSTP_0000025200
Strongyloides stercoralis
SSTP_0000025200
I
SVE_0152400
Strongyloides venezuelensis
SVE_0152400
I
SVUK_0000058801
Strongylus vulgaris
SVUK_0000058801
I
TCNE_0000328801
Toxocara canis
TCNE_0000328801
I
WBGene00237430
Onchocerca volvulus
WBGene00237430
I
WBGene00243299
Onchocerca volvulus
WBGene00243299
I
WUBG_00008
Wuchereria bancrofti
WUBG_00008
I
WUBG_01294
Wuchereria bancrofti
WUBG_01294
I