CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NEUROD4
(
Myotis lucifugus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSMLUG00000028491
T035366_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NEUROD1
M04148_2.00
Homo sapiens
RMCATATGKYVNNNTAWTT
AAWTANNNBRMCATATGKY
SELEX
Yin et al.(2017)
NEUROD1_FL_HT-SELEX
0.880
0.885
NEUROD1
M08057_2.00
Homo sapiens
NNVCAGATGGNNN
NNNCCATCTGBNN
ChIP-seq
Mathelier et al.(2014)
MA1109.1
0.880
0.885
NEUROD1
M08735_2.00
Homo sapiens
RVCAGATGGY
RCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF1_HUMAN.H11MO.0.A
0.880
0.885
Neurod1
M08764_2.00
Mus musculus
RVCAGATGGY
RCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF1_MOUSE.H11MO.0.A
0.880
0.885
Neurod1
M09474_2.00
Mus musculus
RVCAGATGGY
RCCATCTGBY
Misc
Heinz et al.(2010)
Islet-NeuroD1_GSE30298
0.880
0.885
NEUROD1
M09873_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NEUROD_01
0.880
0.885
NEUROD1
M09874_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NEUROD_02
0.880
0.885
NEUROD1
M04149_2.00
Homo sapiens
RVCATATGBYVYNBTAWTW
WAWTAVNRBRVCATATGBY
SELEX
Yin et al.(2017)
NEUROD1_FL_Methyl-HT-SELEX
0.880
0.885
NEUROD2
M02795_2.00
Homo sapiens
RVCATATGKY
RMCATATGBY
SELEX
Jolma et al.(2013)
NEUROD2_1
0.845
0.865
NEUROD2
M04160_2.00
Homo sapiens
RVCATATGKY
RMCATATGBY
SELEX
Yin et al.(2017)
NEUROD2_FL_HT-SELEX
0.845
0.865
NEUROD2
M08737_2.00
Homo sapiens
RRCAGMTGG
CCAKCTGYY
Misc
Kulakovskiy et al.(2013)
NDF2_HUMAN.H11MO.0.B
0.845
0.865
Neurod2
M08770_2.00
Mus musculus
RVCAGATGGB
VCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF2_MOUSE.H11MO.0.A
0.845
0.865
NEUROD2
M04161_2.00
Homo sapiens
RMCATATGBY
RVCATATGKY
SELEX
Yin et al.(2017)
NEUROD2_FL_Methyl-HT-SELEX
0.845
0.865
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMLUP00000020618
bHLH
88
140
RRVKANARERTRMHGLNDALDNLRRVMPCYSKTQKLSKIETLRLARNYIWALS
Links
Other
bHLH
family TFs
Other
Myotis lucifugus
TFs
269 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_03785
Capronia coronata
A1O1_03785
N
A1O3_06320
Capronia epimyces
A1O3_06320
N
A1O5_06001
Cladophialophora psammophila
A1O5_06001
N
A1O7_09417
Cladophialophora yegresii
A1O7_09417
N
A1O9_05511
Exophiala aquamarina
A1O9_05511
N
ANIA_06715
Aspergillus nidulans
CADANIAG00007503
N
ATEG_06370
Aspergillus terreus
CADATEAG00008183
N
BDDG_00964
Blastomyces dermatitidis
BDDG_00964
N
CADAFLAG00000438
Aspergillus flavus
CADAFLAG00000438
N
CADANGAG00005499
Aspergillus niger
CADANGAG00005499
N
CADAORAG00002423
Aspergillus oryzae
CADAORAG00002423
N
EDP43286.1
Malassezia globosa
EDP43286.1
N
EPUS_03374
Endocarpon pusillum
EPUS_03374
N
EURHEDRAFT_448117
Aspergillus ruber
EURHEDRAFT_448117
N
G647_09373
Cladophialophora carrionii
G647_09373
N
HCBG_01177
Histoplasma capsulatum
HCBG_01177
N
HMPREF1120_09024
Exophiala dermatitidis
HMPREF1120_09024
N
HPODL_04058
Ogataea parapolymorpha
HPODL_04058
N
MELLADRAFT_50812
Melampsora laricipopulina
MELLADRAFT_50812
N
NFIA_026870
Neosartorya fischeri
CADNFIAG00002605
N
PAAG_00034
Paracoccidioides sp lutzii
PAAG_00034
N
PABG_05070
Paracoccidioides brasiliensis
PABG_05070
N
PAS_chr1-3_0098
Komagataella pastoris
PAS_chr1-3_0098
N
Pc12g06750
Penicillium chrysogenum
Pc12g06750
N
PCH_Pc12g06750
Penicillium rubens
PCH_Pc12g06750
N
PDE_09266
Penicillium oxalicum
PDE_09266
N
PFL1_06760
Pseudozyma flocculosa
PFL1_06760
N
PGTG_08863
Puccinia graminis
PGTG_08863
N
PITC_033140
Penicillium italicum
PITC_033140
N
PMAA_091540
Talaromyces marneffei
PMAA_091540
N
PMAA_091540
Penicillium marneffei
PMAA_091540
N
PV04_10072
Capronia semiimmersa
PV04_10072
N
PV05_03112
Exophiala xenobiotica
PV05_03112
N
PV06_08089
Exophiala oligosperma
PV06_08089
N
PV07_09262
Cladophialophora immunda
PV07_09262
N
PV08_06900
Exophiala spinifera
PV08_06900
N
PV10_01675
Exophiala mesophila
PV10_01675
N
PVAR5_5971
Byssochlamys spectabilis
PVAR5_5971
N
SJAG_00987
Schizosaccharomyces japonicus
SJAG_00987
N
SOCG_03639
Schizosaccharomyces octosporus
SOCG_03639
N
SPOG_04098
Schizosaccharomyces cryophilus
SPOG_04098
N
TSTA_050320
Talaromyces stipitatus
TSTA_050320
N
U727_0043243011
Penicillium solitum
U727_0043243011
N
UREG_06253
Uncinocarpus reesii
UREG_06253
N
XP_002489438.1
Pichia pastoris
XP_002489438.1
N
Z517_02357
Fonsecaea pedrosoi
Z517_02357
N
Z518_07647
Rhinocladiella mackenziei
Z518_07647
N
Z519_04735
Cladophialophora bantiana
Z519_04735
N