MSC (Monodelphis domestica)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSMODG00000007225 T035489_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Msc
M01730_2.00 		Mus musculus
NVCRKMYGBN
NVCRKMYGBN		 PBM
Weirauch et al.(2014)
pTH5112 		0.914 1.000
MSC
M02801_2.00 		Homo sapiens
AACAGCTGTT
AACAGCTGTT		 SELEX
Jolma et al.(2013)
MSC_1 		0.914 1.000
MSC
M04183_2.00 		Homo sapiens
NRMCAGMTGBYN
NRVCAKCTGKYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_1 		0.914 1.000
MSC
M04184_2.00 		Homo sapiens
NRVCAYVTGBYN
NRVCABRTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_2 		0.914 1.000
MSC
M04187_2.00 		Homo sapiens
NRMCAGCTGBYV
BRVCAGCTGKYN		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_1 		0.914 1.000
MSC
M04188_2.00 		Homo sapiens
BRMCATATGKYN
NRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_2 		0.914 1.000
MSC
M04185_2.00 		Homo sapiens
NRVCAGCTGBBN
NVVCAGCTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_1 		0.914 1.000
MSC
M04186_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_2 		0.914 1.000
MSC
M04189_2.00 		Homo sapiens
BRACAGCTGTYV
BRACAGCTGTYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_1 		0.914 1.000
MSC
M04190_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_2 		0.914 1.000
Tcf21
M01746_2.00 		Mus musculus
RMCAKMTGK
MCAKMTGKY		 PBM
Weirauch et al.(2014)
pTH5087 		0.914 0.981
Tcf21
M02819_2.00 		Mus musculus
VNAACAGCTGTTVN
NBAACAGCTGTTNB		 SELEX
Jolma et al.(2013)
Tcf21_1 		0.914 0.981
TCF21
M04092_2.00 		Homo sapiens
BAACAGCTGBYN
NRVCAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_1 		0.914 0.981
TCF21
M04093_2.00 		Homo sapiens
NRCCATATGKYV
BRMCATATGGYN		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_2 		0.914 0.981
TCF21
M04094_2.00 		Homo sapiens
BAACAGCTGTYV
BRACAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_1 		0.914 0.981
TCF21
M04095_2.00 		Homo sapiens
BACCATATGKYV
BRMCATATGGTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_2 		0.914 0.981
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMODP00000008954 bHLH 121 173

Links

Other bHLH family TFs
Other Monodelphis domestica TFs

188 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_014390 Acremonium chrysogenum ACRE_014390 N 0.000
BBA_01626 Beauveria bassiana BBA_01626 N 0.000
CCM_00106 Cordyceps militaris CCM_00106 N 0.000
CFIO01_08383 Colletotrichum fioriniae CFIO01_08383 N 0.000
CGGC5_8876 Colletotrichum gloeosporioides CGGC5_8876 N 0.000
CH063_10454 Colletotrichum higginsianum CH063_10454 N 0.000
Cob_13289 Colletotrichum orbiculare Cob_13289 N 0.000
CPUR_01633 Claviceps purpurea CPUR_01633 N 0.000
CSUB01_06780 Colletotrichum sublineola CSUB01_06780 N 0.000
e_gw1.4.942.1 Cryphonectria parasitica e_gw1.4.942.1 N 0.000
FFUJ_00487 Fusarium fujikuroi FFUJ_00487 N 0.000
fgenesh1_pg.sca_1_chr1_3_0000989 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0000989 N 0.000
FGRRES_00750 Fusarium graminearum FGRRES_00750 N 0.000
FOXG_01081 Fusarium oxysporum FOXG_01081 N 0.000
FPSE_01269 Fusarium pseudograminearum FPSE_01269 N 0.000
FVEG_00433 Fusarium verticillioides FVEG_00433 N 0.000
GLRG_00605 Colletotrichum graminicola GLRG_00605 N 0.000
HMPREF1624_07505 Sporothrix schenckii HMPREF1624_07505 N 0.000
MAC_05157 Metarhizium acridum MAC_05157 N 0.000
MAJ_06003 Metarhizium majus MAJ_06003 N 0.000
MAM_06097 Metarhizium album MAM_06097 N 0.000
MANI_025150 Metarhizium anisopliae MANI_025150 N 0.000
MBR_00240 Metarhizium brunneum MBR_00240 N 0.000
MGU_08133 Metarhizium guizhouense MGU_08133 N 0.000
NechaG75378 Fusarium solani NechaG75378 N 0.000
OCS_04926 Ophiocordyceps sinensis OCS_04926 N 0.000
PFICI_06254 Pestalotiopsis fici PFICI_06254 N 0.000
SAPIO_CDS5481 Scedosporium apiospermum SAPIO_CDS5481 N 0.000
SPBR_07989 Sporothrix brasiliensis SPBR_07989 N 0.000
TRIATDRAFT_9815 Trichoderma atroviride TRIATDRAFT_9815 N 0.000
TRIREDRAFT_43269 Trichoderma reesei TRIREDRAFT_43269 N 0.000
TRIVIDRAFT_19860 Trichoderma virens TRIVIDRAFT_19860 N 0.000
UCRPA7_6169 Togninia minima UCRPA7_6169 N 0.000
VDBG_07369 Verticillium alfalfae VDBG_07369 N 0.000
VDBG_07369 Verticillium albo atrum VDBG_07369 N 0.000
VHEMI05051 Torrubiella hemipterigena VHEMI05051 N 0.000
X797_002594 Metarhizium robertsii X797_002594 N 0.000