CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ENSONIG00000008797 *(Oreochromis niloticus)* bHLH
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00010 (HLH)	IPR001092	ENSONIG00000008797	T036223_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Clock M01735_2.00	Mus musculus	NNCAYRTGNN	NNCAYRTGNN	PBM Weirauch et al.(2014) pTH5056	0.914	0.902
CLOCK M02789_2.00	Homo sapiens	DACACGTGYH	DRCACGTGTH	SELEX Jolma et al.(2013) CLOCK_1	0.914	0.902
CLOCK M04129_2.00	Homo sapiens	NMCACGTGYN	NRCACGTGKN	SELEX Yin et al.(2017) CLOCK_eDBD_HT-SELEX	0.914	0.902
CLOCK M08728_2.00	Homo sapiens	DBBBCAYKTGNNHB	VDNNCAMRTGVVVH	Misc Kulakovskiy et al.(2013) CLOCK_HUMAN.H11MO.0.C	0.914	0.902
Clock M08760_2.00	Mus musculus	DBBBCAYKTGNNHB	VDNNCAMRTGVVVH	Misc Kulakovskiy et al.(2013) CLOCK_MOUSE.H11MO.0.C	0.914	0.902
Clock M09473_2.00	Mus musculus	CACGTGNN	NNCACGTG	Misc Heinz et al.(2010) Liver-Clock_GSE39860	0.914	0.902
CLOCK M09849_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$CLOCK_Q6	0.914	0.902
CLOCK M04130_2.00	Homo sapiens	NRCRCRTGBH	DVCAYGYGYN	SELEX Yin et al.(2017) CLOCK_eDBD_Methyl-HT-SELEX	0.914	0.902
For this family, TFs with SR scores > 0.838* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSONIP00000011060	bHLH	25	75	KRVSRNKSEKRRRDQFNVLIKELGTMLPGNTRKMDKSTILQKSIDFLCKHK
ENSONIP00000011061	bHLH	35	85	KRVSRNKSEKRRRDQFNVLIKELGTMLPGNTRKMDKSTILQKSIDFLCKHK

Links
Other bHLH family TFs
Other *Oreochromis niloticus* TFs

78 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
CGGC5_12853	Colletotrichum gloeosporioides	CGGC5_12853	N
estExt_Genewise1Plus.C_110567	Neurospora discreta	estExt_Genewise1Plus.C_110567	N
FGRRES_15866_M	Fusarium graminearum	FGRRES_15866_M	N
GLRG_10274	Colletotrichum graminicola	GLRG_10274	N
MAJ_07699	Metarhizium majus	MAJ_07699	N
MAM_06566	Metarhizium album	MAM_06566	N
MGU_09149	Metarhizium guizhouense	MGU_09149	N
MYCTH_2121737	Myceliophthora thermophila	MYCTH_2121737	N
S40285_01779	Stachybotrys chlorohalonata	S40285_01779	N
S40288_03960	Stachybotrys chartarum	S40288_03960	N
TRIVIDRAFT_232488	Trichoderma virens	TRIVIDRAFT_232488	N
UCRPA7_2621	Togninia minima	UCRPA7_2621	N
X797_008957	Metarhizium robertsii	X797_008957	N