CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSONIG00000010970
(
Oreochromis niloticus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSONIG00000010970
T036233_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Arntl
M01751_2.00
Mus musculus
NCACGTGAYN
NRTCACGTGN
PBM
Weirauch et al.(2014)
pTH5064
0.914
1.000
ARNTL
M02787_2.00
Homo sapiens
GTCACGTGAC
GTCACGTGAC
SELEX
Jolma et al.(2013)
ARNTL_1
0.914
1.000
ARNTL
M04124_2.00
Homo sapiens
RDCACGTGHN
NDCACGTGHY
SELEX
Yin et al.(2017)
ARNTL_eDBD_HT-SELEX
0.914
1.000
ARNTL
M08725_2.00
Homo sapiens
NVDCACGTGBN
NVCACGTGHBN
Misc
Kulakovskiy et al.(2013)
BMAL1_HUMAN.H11MO.0.A
0.914
1.000
Arntl
M08776_2.00
Mus musculus
VCACGTGMN
NKCACGTGB
Misc
Kulakovskiy et al.(2013)
BMAL1_MOUSE.H11MO.0.A
0.914
1.000
Arntl
M09478_2.00
Mus musculus
CACGTGNN
NNCACGTG
Misc
Heinz et al.(2010)
Liver-Bmal1_GSE39860
0.914
1.000
Arntl
M09889_2.00
Rattus norvegicus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BMAL1_01
0.914
1.000
ARNTL
M09841_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BMAL1_Q6
0.914
1.000
ARNTL
M04125_2.00
Homo sapiens
NDCACRTGHY
RDCAYGTGHN
SELEX
Yin et al.(2017)
ARNTL_eDBD_Methyl-HT-SELEX
0.914
1.000
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSONIP00000013802
bHLH
92
145
AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR
ENSONIP00000013803
bHLH
98
151
LKEAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR
Links
Other
bHLH
family TFs
Other
Oreochromis niloticus
TFs
89 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_075020
Acremonium chrysogenum
ACRE_075020
N
0.000
CGGC5_547
Colletotrichum gloeosporioides
CGGC5_547
N
0.000
Cob_10044
Colletotrichum orbiculare
Cob_10044
N
0.000
CPUR_04956
Claviceps purpurea
CPUR_04956
N
0.000
CSUB01_05031
Colletotrichum sublineola
CSUB01_05031
N
0.000
CTHT_0022700
Chaetomium thermophilum
CTHT_0022700
N
0.000
estExt_fgenesh1_pg.C_10747
Cryphonectria parasitica
estExt_fgenesh1_pg.C_10747
N
0.000
estExt_Genewise1Plus.C_sca_10_chr8_2_00572
Nectria haematococca
estExt_Genewise1Plus.C_sca_10_chr8_2_00572
N
0.000
F503_04396
Ophiostoma piceae uamh
F503_04396
N
0.000
FFUJ_08604
Fusarium fujikuroi
FFUJ_08604
N
0.000
FGRRES_12742
Fusarium graminearum
FGRRES_12742
N
0.000
FOXG_09425
Fusarium oxysporum
FOXG_09425
N
0.000
FPSE_03532
Fusarium pseudograminearum
FPSE_03532
N
0.000
FVEG_07057
Fusarium verticillioides
FVEG_07057
N
0.000
GGTG_09471
Gaeumannomyces graminis
GGTG_09471
N
0.000
GLRG_00168
Colletotrichum graminicola
GLRG_00168
N
0.000
HMPREF1624_03120
Sporothrix schenckii
HMPREF1624_03120
N
0.000
MAJ_03545
Metarhizium majus
MAJ_03545
N
0.000
MANI_026245
Metarhizium anisopliae
MANI_026245
N
0.000
MBR_07611
Metarhizium brunneum
MBR_07611
N
0.000
MGU_03902
Metarhizium guizhouense
MGU_03902
N
0.000
NCU16667
Neurospora crassa
NCU16667
N
0.000
NechaG71135
Fusarium solani
NechaG71135
N
0.000
PODANS_7_2610
Podospora anserina
PODANS_7_2610
N
0.000
S40285_00214
Stachybotrys chlorohalonata
S40285_00214
N
0.000
S40288_02231
Stachybotrys chartarum
S40288_02231
N
0.000
SPBR_01267
Sporothrix brasiliensis
SPBR_01267
N
0.000
THITE_2155541
Thielavia terrestris
THITE_2155541
N
0.000
TRIATDRAFT_52152
Trichoderma atroviride
TRIATDRAFT_52152
N
0.000
UV8b_1336
Ustilaginoidea virens
UV8b_1336
N
0.000
VDBG_06797
Verticillium alfalfae
VDBG_06797
N
0.000
VDBG_06797
Verticillium albo atrum
VDBG_06797
N
0.000
VHEMI09995
Torrubiella hemipterigena
VHEMI09995
N
0.000
X797_003277
Metarhizium robertsii
X797_003277
N
0.000