tfe3b (Oryzias latipes)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSORLG00000014134 T036441_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TFE3
M02773_2.00 		Homo sapiens
VNCACGTGMY
RKCACGTGNB		 SELEX
Jolma et al.(2013)
TFE3_1 		0.914 1.000
TFE3
M04058_2.00 		Homo sapiens
YVCACGTGAYN
NRTCACGTGBR		 SELEX
Yin et al.(2017)
TFE3_eDBD_HT-SELEX 		0.914 1.000
TFE3
M08709_2.00 		Homo sapiens
TCACGTGACH
DGTCACGTGA		 Misc
Kulakovskiy et al.(2013)
TFE3_HUMAN.H11MO.0.B 		0.914 1.000
TFE3
M09790_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TFEA_Q6 		0.914 1.000
TFE3
M04059_2.00 		Homo sapiens
NRTCACATGBB
VVCATGTGAYN		 SELEX
Yin et al.(2017)
TFE3_eDBD_Methyl-HT-SELEX 		0.914 1.000
Tfe3
M01715_2.00 		Mus musculus
NCDCRTGAYN
NRTCAYGHGN		 PBM
Weirauch et al.(2014)
pTH5057 		0.871 0.981
Tfe3
M05833_2.00 		Mus musculus
CACGTGAY
RTCACGTG		 SMiLE-seq
Isakova et al.(2017)
TFE3 		0.871 0.981
Tfe3
M08743_2.00 		Mus musculus
TCACGTGACH
DGTCACGTGA		 Misc
Kulakovskiy et al.(2013)
TFE3_MOUSE.H11MO.0.A 		0.871 0.981
Tfe3
M09884_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TFEA_01 		0.871 0.981
Mitf
M01741_2.00 		Mus musculus
NCDCGTGAYN
NRTCACGHGN		 PBM
Weirauch et al.(2014)
pTH5465 		0.871 0.963
MITF
M08058_2.00 		Homo sapiens
NNNDRTCACGTGAYHNNN
NNNDRTCACGTGAYHNNN		 ChIP-seq
Mathelier et al.(2014)
MA0620.2 		0.871 0.963
MITF
M08740_2.00 		Homo sapiens
YCAYGTGACH
DGTCACRTGR		 Misc
Kulakovskiy et al.(2013)
MITF_HUMAN.H11MO.0.A 		0.871 0.963
Mitf
M08765_2.00 		Mus musculus
BCHYGTGACY
RGTCACRDGV		 Misc
Kulakovskiy et al.(2013)
MITF_MOUSE.H11MO.0.A 		0.871 0.963
Mitf
M09475_2.00 		Mus musculus
GTCACRWGVB
VBCWYGTGAC		 Misc
Heinz et al.(2010)
MastCells-MITF_GSE48085 		0.871 0.963
MITF
M09880_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MITF_Q4 		0.871 0.963
MITF
M09881_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MITF_Q6 		0.871 0.963
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000017722 bHLH 227 280

Links

Other bHLH family TFs
Other Oryzias latipes TFs

136 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACLA_060680 Aspergillus clavatus CADACLAG00006069 N 0.000
AFUA_3G04070 Aspergillus fumigatus CADAFUAG00000375 N 0.000
ANIA_09397 Aspergillus nidulans CADANIAG00001184 N 0.000
ARB_06056 Arthroderma benhamiae ARB_06056 N 0.000
ATEG_02862 Aspergillus terreus CADATEAG00010270 N 0.000
BDDG_07814 Blastomyces dermatitidis BDDG_07814 N 0.000
CADAFLAG00008613 Aspergillus flavus CADAFLAG00008613 N 0.000
CADANGAG00000016 Aspergillus niger CADANGAG00000016 N 0.000
CADAORAG00011876 Aspergillus oryzae CADAORAG00011876 N 0.000
CIMG_08455 Coccidioides immitis CIMG_08455 N 0.000
CPC735_061230 Coccidioides posadasii CPC735_061230 N 0.000
fgenesh1_pm.00771_#_439 Aspergillus carbonarius fgenesh1_pm.00771_#_439 N 0.000
H102_02756 Trichophyton rubrum H102_02756 N 0.000
H105_02773 Trichophyton soudanense H105_02773 N 0.000
HCBG_08372 Histoplasma capsulatum HCBG_08372 N 0.000
MCYG_02773 Arthroderma otae MCYG_02773 N 0.000
MCYG_02773 Microsporum canis MCYG_02773 N 0.000
NFIA_006380 Neosartorya fischeri CADNFIAG00000086 N 0.000
PAAG_01538 Paracoccidioides sp lutzii PAAG_01538 N 0.000
PABG_03595 Paracoccidioides brasiliensis PABG_03595 N 0.000
Pc14g00630 Penicillium chrysogenum Pc14g00630 N 0.000
PCH_Pc14g00630 Penicillium rubens PCH_Pc14g00630 N 0.000
PDE_01436 Penicillium oxalicum PDE_01436 N 0.000
PDIP_67820 Penicillium digitatum PDIP_67820 N 0.000
PEX1_026460 Penicillium expansum PEX1_026460 N 0.000
PITC_090510 Penicillium italicum PITC_090510 N 0.000
PMAA_005670 Talaromyces marneffei PMAA_005670 N 0.000
PMAA_005670 Penicillium marneffei PMAA_005670 N 0.000
PVAR5_4424 Byssochlamys spectabilis PVAR5_4424 N 0.000
TEQG_04142 Trichophyton equinum TEQG_04142 N 0.000
TESG_01805 Trichophyton tonsurans TESG_01805 N 0.000
TRV_08126 Trichophyton verrucosum TRV_08126 N 0.000
TSTA_104270 Talaromyces stipitatus TSTA_104270 N 0.000
U727_00433631381 Penicillium solitum U727_00433631381 N 0.000
UREG_02530 Uncinocarpus reesii UREG_02530 N 0.000