ENSPFOG00000017027 (Poecilia formosa)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSPFOG00000017027 T036732_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
USF2
M04076_2.00 		Homo sapiens
NVCACGTGVCN
NGBCACGTGBN		 SELEX
Yin et al.(2017)
USF2_eDBD_HT-SELEX 		0.846 0.870
USF2
M08050_2.00 		Homo sapiens
NNVYCACGTGACHNNN
NNNDGTCACGTGRBNN		 ChIP-seq
Mathelier et al.(2014)
MA0526.2 		0.846 0.870
USF2
M07785_2.00 		Homo sapiens
NGTCACGTGRBSVVV
BBBSVYCACGTGACN		 ChIP-seq
Gerstein et al.(2012)
GM12878_USF2_Stanford 		0.846 0.870
USF2
M07786_2.00 		Homo sapiens
NVGTCACGTGRBSVVV
BBBSVYCACGTGACBN		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_USF2_Stanford 		0.846 0.870
USF2
M07787_2.00 		Homo sapiens
RGTCACGTGVB
VBCACGTGACY		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_USF2_Stanford 		0.846 0.870
USF2
M07788_2.00 		Homo sapiens
NGTCACGTGRBSV
BSVYCACGTGACN		 ChIP-seq
Gerstein et al.(2012)
HepG2_USF2_Stanford 		0.846 0.870
USF2
M07789_2.00 		Homo sapiens
RGTCACGTGRBSV
BSVYCACGTGACY		 ChIP-seq
Gerstein et al.(2012)
K562_USF2_Stanford 		0.846 0.870
USF2
M08715_2.00 		Homo sapiens
NVGTCACGTGVBSVNNVNB
VNBNNBSVBCACGTGACBN		 Misc
Kulakovskiy et al.(2013)
USF2_HUMAN.H11MO.0.A 		0.846 0.870
USF2
M09812_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$USF2_01 		0.846 0.870
USF2
M09813_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$USF2_02 		0.846 0.870
USF2
M09814_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$USF2_Q6_01 		0.846 0.870
USF2
M09815_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$USF2_Q6 		0.846 0.870
USF2
M04077_2.00 		Homo sapiens
VNCAYGTGACN
NGTCACRTGNB		 SELEX
Yin et al.(2017)
USF2_eDBD_Methyl-HT-SELEX 		0.846 0.870
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPFOP00000017112 bHLH 193 248

Links

Other bHLH family TFs
Other Poecilia formosa TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA029546 Oryza indica BGIOSGA029546 N
BRADI4G33740 Brachypodium distachyon BRADI4G33740 N
GRMZM2G006578 Zea mays GRMZM2G006578 N
GRMZM2G060290 Zea mays GRMZM2G060290 N
LPERR09G10860 Leersia perrieri LPERR09G10860 N
MLOC_68986 Hordeum vulgare MLOC_68986 N
OB09G21260 Oryza brachyantha OB09G21260 N
OBART09G14730 Oryza barthii OBART09G14730 N
OGLUM09G15360 Oryza glumaepatula OGLUM09G15360 N
OMERI09G11450 Oryza meridionalis OMERI09G11450 N
ONIVA08G17430 Oryza nivara ONIVA08G17430 N
OPUNC09G13200 Oryza punctata OPUNC09G13200 N
ORGLA09G0113500 Oryza glaberrima ORGLA09G0113500 N
ORUFI09G15880 Oryza rufipogon ORUFI09G15880 N
OS09G0489500 Oryza sativa OS09G0489500 N
Pavir.Ba01723 Panicum virgatum Pavir.Ba01723 N
Pavir.J05543 Panicum virgatum Pavir.J05543 N
Pavir.J32240 Panicum virgatum Pavir.J32240 N
PGSC0003DMG400011430 Solanum tuberosum PGSC0003DMG400011430 I
Sb02g028380 Sorghum bicolor Sb02g028380 N
Sb10g024190 Sorghum bicolor Sb10g024190 N
Si006417m.g Setaria italica Si006417m.g N
Si013962m.g Setaria italica Si013962m.g N
Si029606m.g Setaria italica Si029606m.g N
Solyc10g078670.1 Solanum lycopersicum Solyc10g078670.1 I
Traes_5AL_39649C38E Triticum aestivum Traes_5AL_39649C38E N
Traes_5BL_C08428870 Triticum aestivum Traes_5BL_C08428870 N
Traes_5DL_1950C1FC2 Triticum aestivum Traes_5DL_1950C1FC2 N