TCF3 (Pteropus vampyrus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSPVAG00000014587 T037149_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCF3
M02775_2.00 		Homo sapiens
NVCACCTGBN
NVCAGGTGBN		 SELEX
Jolma et al.(2013)
TCF3_1 		0.914 1.000
TCF3
M08710_2.00 		Homo sapiens
VVCASCTGCHN
NDGCAGSTGBB		 Misc
Kulakovskiy et al.(2013)
TFE2_HUMAN.H11MO.0.A 		0.914 1.000
TCF3
M09791_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E12_Q6 		0.914 1.000
TCF3
M09792_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2A_Q6_01 		0.914 1.000
TCF3
M09793_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2A_Q6_02 		0.914 1.000
TCF3
M09794_2.00 		Homo sapiens
VVVVMCACCTGCNBB
VVNGCAGGTGKBBBB		 Transfac
Matys et al.(2006)
V$E47_01 		0.914 1.000
TCF3
M09795_2.00 		Homo sapiens
NNKWRCACCTGYDNNN
NNNHRCAGGTGYWMNN		 Transfac
Matys et al.(2006)
V$E47_02 		0.914 1.000
Tcf3
M09465_2.00 		Mus musculus
ABWTCAAAGS
SCTTTGAWVT		 Misc
Heinz et al.(2010)
mES-Tcf3_GSE11724 		0.886 0.942
Tcf3
M09466_2.00 		Mus musculus
VCAGCTGBNN
NNVCAGCTGB		 Misc
Heinz et al.(2010)
proBcell-E2A_GSE21978 		0.886 0.942
Tcf3
M09886_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E47_05 		0.886 0.942
Tcf12
M01740_2.00 		Mus musculus
NVCAYCTGB
VCAGRTGBN		 PBM
Weirauch et al.(2014)
pTH5071 		0.886 0.923
TCF12
M04137_2.00 		Homo sapiens
VCACSTGB
VCASGTGB		 SELEX
Yin et al.(2017)
TCF12_eDBD_HT-SELEX 		0.886 0.923
Tcf12
M08062_2.00 		Mus musculus
RRCAGCTGNNN
NNNCAGCTGYY		 ChIP-seq
Mathelier et al.(2014)
MA0521.1 		0.886 0.923
TCF12
M07805_2.00 		Homo sapiens
NVDSCAGSTGB
VCASCTGSHBN		 ChIP-seq
Gerstein et al.(2012)
GM12878_TCF12_HudsonAlpha 		0.886 0.923
TCF12
M07806_2.00 		Homo sapiens
VCASCTGB
VCAGSTGB		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_TCF12_HudsonAlpha 		0.886 0.923
TCF12
M08731_2.00 		Homo sapiens
CMCASCTGSH
DSCAGSTGKG		 Misc
Kulakovskiy et al.(2013)
HTF4_HUMAN.H11MO.0.A 		0.886 0.923
Tcf12
M08762_2.00 		Mus musculus
VMCASCTGSH
DSCAGSTGKB		 Misc
Kulakovskiy et al.(2013)
HTF4_MOUSE.H11MO.0.A 		0.886 0.923
TCF12
M09458_2.00 		Homo sapiens
NNVCAGCTGB
VCAGCTGBNN		 Misc
Heinz et al.(2010)
GM12878-Tcf12_GSE32465 		0.886 0.923
TCF12
M09858_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HEB_Q6 		0.886 0.923
TCF12
M09859_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HTF4_Q2 		0.886 0.923
TCF12
M09860_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_01 		0.886 0.923
TCF12
M09861_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_03 		0.886 0.923
TCF12
M09862_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_05 		0.886 0.923
TCF12
M04138_2.00 		Homo sapiens
NCAYCTGN
NCAGRTGN		 SELEX
Yin et al.(2017)
TCF12_eDBD_Methyl-HT-SELEX 		0.886 0.923
Tcf3
M00753_2.00 		Mus musculus
VCACCTGBN
NVCAGGTGB		 PBM
Weirauch et al.(2013)
pTH3866 		0.886 0.846
Tcf3
M01723_2.00 		Mus musculus
NNVCACSTGB
VCASGTGBNN		 PBM
Weirauch et al.(2014)
pTH4580 		0.886 0.846
Tcf3
M00118_2.00 		Mus musculus
VCAYCTGB
VCAGRTGB		 PBM
Badis et al.(2009)
Tcfe2a_3865 		0.886 0.846
Tcf4
M01750_2.00 		Mus musculus
VCAGVTGBN
NVCABCTGB		 PBM
Weirauch et al.(2014)
pTH5101 		0.884 0.885
TCF4
M02807_2.00 		Homo sapiens
HRCACCTGBN
NVCAGGTGYD		 SELEX
Jolma et al.(2013)
TCF4_1 		0.884 0.885
TCF4
M02808_2.00 		Homo sapiens
NVCACCTBBN
NVVAGGTGBN		 SELEX
Jolma et al.(2013)
TCF4_2 		0.884 0.885
TCF4
M02728_2.00 		Homo sapiens
RCACCTG
CAGGTGY		 SELEX
Jolma et al.(2010)
TCF4_dimer 		0.884 0.885
TCF4
M04214_2.00 		Homo sapiens
VCACCTGB
VCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_HT-SELEX 		0.884 0.885
Tcf4
M08775_2.00 		Mus musculus
HRCACCTGB
VCAGGTGYD		 Misc
Kulakovskiy et al.(2013)
ITF2_MOUSE.H11MO.0.B 		0.884 0.885
TCF4
M09461_2.00 		Homo sapiens
ASWTCAAAGRVN
NBYCTTTGAWST		 Misc
Heinz et al.(2010)
Hct116-Tcf4_SRA012054 		0.884 0.885
TCF4
M04215_2.00 		Homo sapiens
VCACCTGN
NCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_Methyl-HT-SELEX 		0.884 0.885
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPVAP00000013753 bHLH 528 581

Links

Other bHLH family TFs
Other Pteropus vampyrus TFs

208 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL018187 Aedes aegypti AAEL018187 I 0.000
AALB009566 Anopheles albimanus AALB009566 I 0.000
Aan_R003515 Calypte anna Aan_R003515 I 0.000
Aan_R010366 Calypte anna Aan_R010366 I 0.000
AARA009846 Anopheles arabiensis AARA009846 I 0.000
AATE005421 Anopheles atroparvus AATE005421 I 0.000
ACUA002164 Anopheles culicifacies ACUA002164 I 0.000
ACYPI21591 Acyrthosiphon pisum ACYPI21591 I 0.000
ADIR003350 Anopheles dirus ADIR003350 I 0.000
AEPI007299 Anopheles epiroticus AEPI007299 I 0.000
AFAF001586 Anopheles farauti AFAF001586 I 0.000
Afo_R000794 Aptenodytes forsteri Afo_R000794 I 0.000
Afo_R013485 Aptenodytes forsteri Afo_R013485 I 0.000
AFUN011236 Anopheles funestus AFUN011236 I 0.000
AGAP003940 Anopheles gambiae AGAP003940 I 0.000
Alligator_sinensis_CCG002668.1 Alligator sinensis Alligator_sinensis_CCG002668.1 I 0.000
Alligator_sinensis_CCG016523.1 Alligator sinensis Alligator_sinensis_CCG016523.1 I 0.000
AMAM019487 Anopheles maculatus AMAM019487 I 0.000
AMIN000296 Anopheles minimus AMIN000296 I 0.000
Aqu1.218417 Amphimedon queenslandica Aqu1.218417 I 0.000
Aqu1.221965 Amphimedon queenslandica Aqu1.221965 I 0.000
Aqu1.221966 Amphimedon queenslandica Aqu1.221966 I 0.000
AQUA009136 Anopheles quadriannulatus AQUA009136 I 0.000
ASIS014250 Anopheles sinensis ASIS014250 I 0.000
ASTEI00952 Anopheles stephensi ASTEI00952 I 0.000
BGIBMGA000445 Bombyx mori BGIBMGA000445 I 0.000
BGLB014390 Biomphalaria glabrata BGLB014390 I 0.000
Brh_R000146 Buceros rhinoceros Brh_R000146 I 0.000
Brh_R003679 Buceros rhinoceros Brh_R003679 I 0.000
Cflo_09362--XP_394749.3_APIME Camponotus floridanus Cflo_09362--XP_394749.3_APIME I 0.000
CGI_10014633 Crassostrea gigas CGI_10014633 I 0.000
CLEC011741 Cimex lectularius CLEC011741 I 0.000
Cmyd_10015695 Chelonia mydas Cmyd_10015695 I 0.000
Cmyd_10016296 Chelonia mydas Cmyd_10016296 I 0.000
CPIJ001711 Culex quinquefasciatus CPIJ001711 I 0.000
CpipJ_CPIJ001711 Culex pipiens CpipJ_CPIJ001711 I 0.000
DAPPUDRAFT_51691 Daphnia pulex DAPPUDRAFT_51691 I 0.000
ENSACAG00000011719 Anolis carolinensis ENSACAG00000011719 I 0.000
ENSACAG00000012187 Anolis carolinensis ENSACAG00000012187 I 0.000
ENSAMEG00000004934 Ailuropoda melanoleuca ENSAMEG00000004934 I 0.000
ENSAMEG00000016548 Ailuropoda melanoleuca ENSAMEG00000016548 I 0.000
ENSAMXG00000006838 Astyanax mexicanus ENSAMXG00000006838 I 0.000
ENSAMXG00000017753 Astyanax mexicanus ENSAMXG00000017753 I 0.000
ENSAPLG00000002586 Anas platyrhynchos ENSAPLG00000002586 I 0.000
ENSAPLG00000014618 Anas platyrhynchos ENSAPLG00000014618 I 0.000
ENSBTAP00000014397-D1 Bos grunniens ENSBTAP00000014397-D1 I 0.000
ENSBTAP00000017410-D1 Bos grunniens ENSBTAP00000017410-D1 I 0.000
ENSCSAG00000002781 Chlorocebus sabaeus ENSCSAG00000002781 I 0.000
ENSCSAG00000007275 Chlorocebus sabaeus ENSCSAG00000007275 I 0.000
ENSCSAVG00000004000 Ciona savignyi ENSCSAVG00000004000 I 0.000
ENSFALG00000006460 Ficedula albicollis ENSFALG00000006460 I 0.000
ENSFALG00000008767 Ficedula albicollis ENSFALG00000008767 I 0.000
ENSGALG00000003654 Gallus gallus ENSGALG00000003654 I 0.000
ENSGMOG00000002294 Gadus morhua ENSGMOG00000002294 I 0.000
ENSGMOG00000012022 Gadus morhua ENSGMOG00000012022 I 0.000
ENSLACG00000011453 Latimeria chalumnae ENSLACG00000011453 I 0.000
ENSLAFG00000031464 Loxodonta africana ENSLAFG00000031464 I 0.000
ENSLOCG00000000236 Lepisosteus oculatus ENSLOCG00000000236 I 0.000
ENSLOCG00000004428 Lepisosteus oculatus ENSLOCG00000004428 I 0.000
ENSLOCG00000005491 Lepisosteus oculatus ENSLOCG00000005491 I 0.000
ENSMEUG00000015975 Macropus eugenii ENSMEUG00000015975 I 0.000
ENSMMUG00000020375 Macaca mulatta ENSMMUG00000020375 I 0.000
ENSMPUG00000003606 Mustela putorius furo ENSMPUG00000003606 I 0.000
ENSMPUG00000014265 Mustela putorius furo ENSMPUG00000014265 I 0.000
ENSNLEG00000001602 Nomascus leucogenys ENSNLEG00000001602 I 0.000
ENSNLEG00000002304 Nomascus leucogenys ENSNLEG00000002304 I 0.000
ENSOANG00000014185 Ornithorhynchus anatinus ENSOANG00000014185 I 0.000
ENSOARG00000016041 Ovis aries ENSOARG00000016041 I 0.000
ENSOARG00000018638 Ovis aries ENSOARG00000018638 I 0.000
ENSONIG00000008179 Oreochromis niloticus ENSONIG00000008179 I 0.000
ENSONIG00000013504 Oreochromis niloticus ENSONIG00000013504 I 0.000
ENSORLG00000008113 Oryzias latipes ENSORLG00000008113 I 0.000
ENSP00000226247 Macaca fascicularis ENSP00000226247 I 0.000
ENSP00000299162 Macaca fascicularis ENSP00000299162 I 0.000
ENSPANG00000019523 Papio anubis ENSPANG00000019523 I 0.000
ENSPANG00000023451 Papio anubis ENSPANG00000023451 I 0.000
ENSPFOG00000006570 Poecilia formosa ENSPFOG00000006570 I 0.000
ENSPFOG00000013538 Poecilia formosa ENSPFOG00000013538 I 0.000
ENSPMAG00000004307 Petromyzon marinus ENSPMAG00000004307 I 0.000
ENSPPYG00000008096 Pongo abelii ENSPPYG00000008096 I 0.000
ENSPSIG00000004744 Pelodiscus sinensis ENSPSIG00000004744 I 0.000
ENSPSIG00000009226 Pelodiscus sinensis ENSPSIG00000009226 I 0.000
ENSSARG00000006773 Sorex araneus ENSSARG00000006773 I 0.000
ENSSHAG00000013650 Sarcophilus harrisii ENSSHAG00000013650 I 0.000
ENSSSCG00000009936 Sus scrofa ENSSSCG00000009936 I 0.000
ENSSSCG00000022921 Sus scrofa ENSSSCG00000022921 I 0.000
ENSSTOG00000028800 Ictidomys tridecemlineatus ENSSTOG00000028800 I 0.000
ENSSTOG00000028981 Ictidomys tridecemlineatus ENSSTOG00000028981 I 0.000
ENSXMAG00000007879 Xiphophorus maculatus ENSXMAG00000007879 I 0.000
ENSXMAG00000011786 Xiphophorus maculatus ENSXMAG00000011786 I 0.000
estExt_fgenesh2_pg.C_1860025 Branchiostoma floridae estExt_fgenesh2_pg.C_1860025 I 0.000
e_gw.490.9.1 Branchiostoma floridae e_gw.490.9.1 I 0.000
fgenesh2_pg.scaffold_129000050 Branchiostoma floridae fgenesh2_pg.scaffold_129000050 I 0.000
FOXN1 Bos taurus ENSBTAG00000013095 I 0.000
FOXN1 Canis familiaris ENSCAFG00000018709 I 0.000
FOXN1 Callithrix jacchus ENSCJAG00000012705 I 0.000
FOXN1 Cavia porcellus ENSCPOG00000009810 I 0.000
foxn1 Danio rerio ENSDARG00000011879 I 0.000
FOXN1 Dasypus novemcinctus ENSDNOG00000006144 I 0.000
Foxn1 Dipodomys ordii ENSDORG00000015116 I 0.000
FOXN1 Equus caballus ENSECAG00000010691 I 0.000
FOXN1 Erinaceus europaeus ENSEEUG00000006629 I 0.000
FOXN1 Echinops telfairi ENSETEG00000015002 I 0.000
FOXN1 Felis catus ENSFCAG00000008268 I 0.000
FOXN1 Homo sapiens ENSG00000109101 D 0.000
foxn1 Gasterosteus aculeatus ENSGACG00000008619 I 0.000
FOXN1 Gorilla gorilla ENSGGOG00000009682 I 0.000
FOXN1 Loxodonta africana ENSLAFG00000014501 I 0.000
FOXN1 Meleagris gallopavo ENSMGAG00000005734 I 0.000
FOXN1 Microcebus murinus ENSMICG00000016795 I 0.000
FOXN1 Myotis lucifugus ENSMLUG00000012353 I 0.000
FOXN1 Macaca mulatta ENSMMUG00000021975 I 0.000
FOXN1 Monodelphis domestica ENSMODG00000019251 I 0.000
Foxn1 Mus musculus ENSMUSG00000002057 D 0.000
FOXN1 Oryctolagus cuniculus ENSOCUG00000013779 I 0.000
FOXN1 Otolemur garnettii ENSOGAG00000007093 I 0.000
FOXN1 Ochotona princeps ENSOPRG00000012389 I 0.000
FOXN1 Procavia capensis ENSPCAG00000010796 I 0.000
FOXN1 Pan troglodytes ENSPTRG00000008920 I 0.000
FOXN1 Pteropus vampyrus ENSPVAG00000002892 I 0.000
Foxn1 Rattus norvegicus ENSRNOG00000010870 I 0.000
FOXN1 Tupaia belangeri ENSTBEG00000007940 I 0.000
FOXN1 Taeniopygia guttata ENSTGUG00000005999 I 0.000
FOXN1 Tursiops truncatus ENSTTRG00000004014 I 0.000
FOXN4 Bos taurus ENSBTAG00000010847 I 0.000
FOXN4 Canis familiaris ENSCAFG00000010915 I 0.000
FOXN4 Callithrix jacchus ENSCJAG00000010010 I 0.000
FOXN4 Cavia porcellus ENSCPOG00000000942 I 0.000
foxn4 Danio rerio ENSDARG00000010591 I 0.000
FOXN4 Dasypus novemcinctus ENSDNOG00000015606 I 0.000
FOXN4 Felis catus ENSFCAG00000003124 I 0.000
FOXN4 Homo sapiens ENSG00000139445 I 0.000
foxn4 Gasterosteus aculeatus ENSGACG00000009215 I 0.000
FoxN4 Gallus gallus ENSGALG00000005062 I 0.000
FOXN4 Gorilla gorilla ENSGGOG00000009323 I 0.000
FOXN4 Meleagris gallopavo ENSMGAG00000006116 I 0.000
Foxn4 Mus musculus ENSMUSG00000042002 D 0.000
FOXN4 Ornithorhynchus anatinus ENSOANG00000008810 I 0.000
FOXN4 Oryctolagus cuniculus ENSOCUG00000005185 I 0.000
FOXN4 Otolemur garnettii ENSOGAG00000007455 I 0.000
FOXN4 Ochotona princeps ENSOPRG00000006537 I 0.000
FOXN4 Oryzias latipes ENSORLG00000007587 I 0.000
FOXN4 Pan troglodytes ENSPTRG00000005421 I 0.000
FOXN4 Pteropus vampyrus ENSPVAG00000007463 I 0.000
Foxn4 Rattus norvegicus ENSRNOG00000000691 I 0.000
FOXN4 Tupaia belangeri ENSTBEG00000005233 I 0.000
FOXN4 Taeniopygia guttata ENSTGUG00000007235 I 0.000
foxn4 Tetraodon nigroviridis ENSTNIG00000015894 I 0.000
foxn4 Takifugu rubripes ENSTRUG00000015456 I 0.000
FOXN4 Tursiops truncatus ENSTTRG00000006397 I 0.000
foxn4 Xenopus tropicalis XB-GENE-981086 I 0.000
foxn4.S Xenopus laevis XB-GENE-981090 I 0.000
GA17887 Drosophila pseudoobscura FBgn0077896 I 0.000
GA25156 Drosophila pseudoobscura FBgn0246538 I 0.000
GB41890 Apis mellifera GB41890 I 0.000
GD18690 Drosophila simulans FBgn0190211 I 0.000
GE26032 Drosophila yakuba FBgn0243075 I 0.000
GF17528 Drosophila ananassae FBgn0094546 I 0.000
Gfo_R003176 Geospiza fortis Gfo_R003176 I 0.000
Gfo_R011440 Geospiza fortis Gfo_R011440 I 0.000
GG17529 Drosophila erecta FBgn0109754 I 0.000
GH19127 Drosophila grimshawi FBgn0126594 I 0.000
GI23584 Drosophila mojavensis FBgn0146310 I 0.000
GJ23559 Drosophila virilis FBgn0210656 I 0.000
GK11545 Drosophila willistoni FBgn0213556 I 0.000
GM23879 Drosophila sechellia FBgn0178744 I 0.000
gw.612.6.1 Branchiostoma floridae gw.612.6.1 I 0.000
HelroG87232 Helobdella robusta HelroG87232 N 0.000
HHAL008872-PA Halyomorpha halys HHAL008872-PA I 0.000
ISCW008179 Ixodes scapularis ISCW008179 I 0.000
jumu Drosophila melanogaster FBgn0015396 D 0.000
KGM_21935 Danaus plexippus KGM_21935 I 0.000
L798_10143 Zootermopsis nevadensis L798_10143 I 0.000
LCUP000947 Lucilia cuprina LCUP000947 I 0.000
LDEC004155 Leptinotarsa decemlineata LDEC004155 I 0.000
LLOJ002533 Lutzomyia longipalpis LLOJ002533 I 0.000
LotgiG77849 Lottia gigantea LotgiG77849 I 0.000
MDOA003678 Musca domestica MDOA003678 I 0.000
Myotis_brandtii_Foxn1_10015981 Myotis brandtii Myotis_brandtii_Foxn1_10015981 I 0.000
Myotis_brandtii_FOXN4_10027419 Myotis brandtii Myotis_brandtii_FOXN4_10027419 I 0.000
NEMVEDRAFT_v1g121754 Nematostella vectensis NEMVEDRAFT_v1g121754 I 0.000
Ogr03484 Ophisaurus gracilis Ogr03484 I 0.000
Ogr14394 Ophisaurus gracilis Ogr14394 I 0.000
PHUM047550 Pediculus humanus PHUM047550 I 0.000
PPAI007934 Phlebotomus papatasi PPAI007934 I 0.000
Pvit_00420 Pogona vitticeps Pvit_00420 I 0.000
Pvit_02436 Pogona vitticeps Pvit_02436 I 0.000
RPRC003475 Rhodnius prolixus RPRC003475 I 0.000
Sakowv30034418m.g Saccoglossus kowalevskii Sakowv30034418m.g I 0.000
SINV24088 Solenopsis invicta SINV24088 I 0.000
SMAR013946 Strigamia maritima SMAR013946 I 0.000
Tal_R000657 Tyto alba Tal_R000657 I 0.000
Tal_R011069 Tyto alba Tal_R011069 I 0.000
TC012532 Tribolium castaneum TC012532 I 0.000
TriadG51743 Trichoplax adhaerens TriadG51743 I 0.000
XP_002166457.1 Hydra magnipapillata XP_002166457.1 I 0.000
XP_002937190 Xenopus tropicalis XP_002937190 I 0.000
YQE_08440 Dendroctonus ponderosae YQE_08440 I 0.000