TCF4 (Sorex araneus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSSARG00000001666 T037261_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tcf4
M01750_2.00 		Mus musculus
VCAGVTGBN
NVCABCTGB		 PBM
Weirauch et al.(2014)
pTH5101 		0.847 0.909
TCF4
M02807_2.00 		Homo sapiens
HRCACCTGBN
NVCAGGTGYD		 SELEX
Jolma et al.(2013)
TCF4_1 		0.847 0.909
TCF4
M02808_2.00 		Homo sapiens
NVCACCTBBN
NVVAGGTGBN		 SELEX
Jolma et al.(2013)
TCF4_2 		0.847 0.909
TCF4
M02728_2.00 		Homo sapiens
RCACCTG
CAGGTGY		 SELEX
Jolma et al.(2010)
TCF4_dimer 		0.847 0.909
TCF4
M04214_2.00 		Homo sapiens
VCACCTGB
VCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_HT-SELEX 		0.847 0.909
Tcf4
M08775_2.00 		Mus musculus
HRCACCTGB
VCAGGTGYD		 Misc
Kulakovskiy et al.(2013)
ITF2_MOUSE.H11MO.0.B 		0.847 0.909
TCF4
M09461_2.00 		Homo sapiens
ASWTCAAAGRVN
NBYCTTTGAWST		 Misc
Heinz et al.(2010)
Hct116-Tcf4_SRA012054 		0.847 0.909
TCF4
M04215_2.00 		Homo sapiens
VCACCTGN
NCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_Methyl-HT-SELEX 		0.847 0.909
Tcf12
M01740_2.00 		Mus musculus
NVCAYCTGB
VCAGRTGBN		 PBM
Weirauch et al.(2014)
pTH5071 		0.845 0.864
TCF12
M04137_2.00 		Homo sapiens
VCACSTGB
VCASGTGB		 SELEX
Yin et al.(2017)
TCF12_eDBD_HT-SELEX 		0.845 0.864
Tcf12
M08062_2.00 		Mus musculus
RRCAGCTGNNN
NNNCAGCTGYY		 ChIP-seq
Mathelier et al.(2014)
MA0521.1 		0.845 0.864
TCF12
M07805_2.00 		Homo sapiens
NVDSCAGSTGB
VCASCTGSHBN		 ChIP-seq
Gerstein et al.(2012)
GM12878_TCF12_HudsonAlpha 		0.845 0.864
TCF12
M07806_2.00 		Homo sapiens
VCASCTGB
VCAGSTGB		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_TCF12_HudsonAlpha 		0.845 0.864
TCF12
M08731_2.00 		Homo sapiens
CMCASCTGSH
DSCAGSTGKG		 Misc
Kulakovskiy et al.(2013)
HTF4_HUMAN.H11MO.0.A 		0.845 0.864
Tcf12
M08762_2.00 		Mus musculus
VMCASCTGSH
DSCAGSTGKB		 Misc
Kulakovskiy et al.(2013)
HTF4_MOUSE.H11MO.0.A 		0.845 0.864
TCF12
M09458_2.00 		Homo sapiens
NNVCAGCTGB
VCAGCTGBNN		 Misc
Heinz et al.(2010)
GM12878-Tcf12_GSE32465 		0.845 0.864
TCF12
M09858_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HEB_Q6 		0.845 0.864
TCF12
M09859_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HTF4_Q2 		0.845 0.864
TCF12
M09860_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_01 		0.845 0.864
TCF12
M09861_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_03 		0.845 0.864
TCF12
M09862_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_05 		0.845 0.864
TCF12
M04138_2.00 		Homo sapiens
NCAYCTGN
NCAGRTGN		 SELEX
Yin et al.(2017)
TCF12_eDBD_Methyl-HT-SELEX 		0.845 0.864
Tcf3
M00753_2.00 		Mus musculus
VCACCTGBN
NVCAGGTGB		 PBM
Weirauch et al.(2013)
pTH3866 		0.845 0.841
Tcf3
M01723_2.00 		Mus musculus
NNVCACSTGB
VCASGTGBNN		 PBM
Weirauch et al.(2014)
pTH4580 		0.845 0.841
Tcf3
M00118_2.00 		Mus musculus
VCAYCTGB
VCAGRTGB		 PBM
Badis et al.(2009)
Tcfe2a_3865 		0.845 0.841
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSARP00000001519 bHLH 568 613

Links

Other bHLH family TFs
Other Sorex araneus TFs

135 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_118399 Agaricus bisporus AGABI2DRAFT_118399 N
AGABI2DRAFT_187697 Agaricus bisporus AGABI2DRAFT_187697 I
AGABI2DRAFT_222360 Agaricus bisporus AGABI2DRAFT_222360 I
BN946_scf184969.g81 Trametes cinnabarina BN946_scf184969.g81 N
CC1G_15575 Coprinopsis cinerea CC1G_15575 I
CERSUDRAFT_112795 Ceriporiopsis subvermispora CERSUDRAFT_112795 I
CERSUDRAFT_112798 Ceriporiopsis subvermispora CERSUDRAFT_112798 N
CERSUDRAFT_114708 Ceriporiopsis subvermispora CERSUDRAFT_114708 N
CERSUDRAFT_145919 Ceriporiopsis subvermispora CERSUDRAFT_145919 N
CY34DRAFT_797799 Suillus luteus CY34DRAFT_797799 N
CY34DRAFT_803634 Suillus luteus CY34DRAFT_803634 N
CY34DRAFT_804702 Suillus luteus CY34DRAFT_804702 N
DACRYDRAFT_21143 Dacryopinax sp DACRYDRAFT_21143 I
DICSQDRAFT_156876 Dichomitus squalens DICSQDRAFT_156876 N
EuGene6000029 Heterobasidion annosum EuGene6000029 N
fgenesh1_pg.C_scaffold_4000651 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_4000651 N
FOMPIDRAFT_1121285 Fomitopsis pinicola FOMPIDRAFT_1121285 N
FOMPIDRAFT_148963 Fomitopsis pinicola FOMPIDRAFT_148963 I
FOMPIDRAFT_151847 Fomitopsis pinicola FOMPIDRAFT_151847 N
GALMADRAFT_222679 Galerina marginata GALMADRAFT_222679 I
GALMADRAFT_96046 Galerina marginata GALMADRAFT_96046 I
GLOTRDRAFT_137935 Gloeophyllum trabeum GLOTRDRAFT_137935 N
GLOTRDRAFT_139640 Gloeophyllum trabeum GLOTRDRAFT_139640 N
GLOTRDRAFT_48184 Gloeophyllum trabeum GLOTRDRAFT_48184 N
GLOTRDRAFT_80766 Gloeophyllum trabeum GLOTRDRAFT_80766 N
GYMLUDRAFT_204658 Gymnopus luxurians GYMLUDRAFT_204658 N
GYMLUDRAFT_42922 Gymnopus luxurians GYMLUDRAFT_42922 I
GYMLUDRAFT_45397 Gymnopus luxurians GYMLUDRAFT_45397 I
HETIRDRAFT_327516 Heterobasidion irregulare HETIRDRAFT_327516 N
HETIRDRAFT_459850 Heterobasidion irregulare HETIRDRAFT_459850 N
HYDPIDRAFT_175933 Hydnomerulius pinastri HYDPIDRAFT_175933 N
JAAARDRAFT_123795 Jaapia argillacea JAAARDRAFT_123795 N
JAAARDRAFT_157067 Jaapia argillacea JAAARDRAFT_157067 N
JAAARDRAFT_30847 Jaapia argillacea JAAARDRAFT_30847 I
JAAARDRAFT_36304 Jaapia argillacea JAAARDRAFT_36304 N
K443DRAFT_2600 Laccaria amethystina K443DRAFT_2600 I
K443DRAFT_674079 Laccaria amethystina K443DRAFT_674079 I
K443DRAFT_679409 Laccaria amethystina K443DRAFT_679409 N
LACBIDRAFT_317135 Laccaria bicolor LACBIDRAFT_317135 I
M404DRAFT_13375 Pisolithus tinctorius M404DRAFT_13375 N
M404DRAFT_997690 Pisolithus tinctorius M404DRAFT_997690 N
M404DRAFT_997743 Pisolithus tinctorius M404DRAFT_997743 N
M408DRAFT_88636 Serendipita vermifera M408DRAFT_88636 I
M413DRAFT_310281 Hebeloma cylindrosporum M413DRAFT_310281 I
M413DRAFT_445487 Hebeloma cylindrosporum M413DRAFT_445487 I
M413DRAFT_446927 Hebeloma cylindrosporum M413DRAFT_446927 N
M413DRAFT_446984 Hebeloma cylindrosporum M413DRAFT_446984 I
Moror_11062 Moniliophthora roreri Moror_11062 I
Moror_14051 Moniliophthora roreri Moror_14051 N
Moror_17515 Moniliophthora roreri Moror_17515 I
Moror_4700 Moniliophthora roreri Moror_4700 I
Moror_6764 Moniliophthora roreri Moror_6764 N
PAXRUDRAFT_822949 Paxillus rubicundulus PAXRUDRAFT_822949 N
PAXRUDRAFT_827363 Paxillus rubicundulus PAXRUDRAFT_827363 N
PAXRUDRAFT_9870 Paxillus rubicundulus PAXRUDRAFT_9870 N
PHACADRAFT_208392 Phanerochaete carnosa PHACADRAFT_208392 N
PHLGIDRAFT_127425 Phlebiopsis gigantea PHLGIDRAFT_127425 N
PHLGIDRAFT_175743 Phlebiopsis gigantea PHLGIDRAFT_175743 N
PHLGIDRAFT_32525 Phlebiopsis gigantea PHLGIDRAFT_32525 I
PILCRDRAFT_142493 Piloderma croceum PILCRDRAFT_142493 N
PILCRDRAFT_723293 Piloderma croceum PILCRDRAFT_723293 N
PILCRDRAFT_824811 Piloderma croceum PILCRDRAFT_824811 N
PISMIDRAFT_100858 Pisolithus microcarpus PISMIDRAFT_100858 N
PISMIDRAFT_680566 Pisolithus microcarpus PISMIDRAFT_680566 N
PLEOSDRAFT_1034000 Pleurotus ostreatus PLEOSDRAFT_1034000 N
PLEOSDRAFT_1097493 Pleurotus ostreatus PLEOSDRAFT_1097493 I
PLEOSDRAFT_30253 Pleurotus ostreatus PLEOSDRAFT_30253 I
PLICRDRAFT_47417 Plicaturopsis crispa PLICRDRAFT_47417 N
PLICRDRAFT_47428 Plicaturopsis crispa PLICRDRAFT_47428 N
POSPLDRAFT_101241 Postia placenta POSPLDRAFT_101241 N
POSPLDRAFT_92174 Postia placenta POSPLDRAFT_92174 N
POSPLDRAFT_92176 Postia placenta POSPLDRAFT_92176 N
POSPLDRAFT_92179 Postia placenta POSPLDRAFT_92179 N
POSPLDRAFT_92181 Postia placenta POSPLDRAFT_92181 N
POSPLDRAFT_92233 Postia placenta POSPLDRAFT_92233 N
POSPLDRAFT_97457 Postia placenta POSPLDRAFT_97457 N
POSPLDRAFT_97461 Postia placenta POSPLDRAFT_97461 N
SCHCODRAFT_102295 Schizophyllum commune SCHCODRAFT_102295 N
SCHCODRAFT_111379 Schizophyllum commune SCHCODRAFT_111379 I
SCHCODRAFT_258888 Schizophyllum commune SCHCODRAFT_258888 I
SCHCODRAFT_269946 Schizophyllum commune SCHCODRAFT_269946 N
SCHCODRAFT_57027 Schizophyllum commune SCHCODRAFT_57027 N
SCHCODRAFT_63410 Schizophyllum commune SCHCODRAFT_63410 I
SCLCIDRAFT_1222350 Scleroderma citrinum SCLCIDRAFT_1222350 N
SCLCIDRAFT_13431 Scleroderma citrinum SCLCIDRAFT_13431 I
SERLA73DRAFT_177669 Serpula lacrymans SERLA73DRAFT_177669 N
SERLA73DRAFT_75787 Serpula lacrymans SERLA73DRAFT_75787 N
SERLA73DRAFT_87647 Serpula lacrymans SERLA73DRAFT_87647 N