tfap4 (Tetraodon nigroviridis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSTNIG00000002015 T037704_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tfap4
M01717_2.00 		Mus musculus
VHCABVYGB
VCRBVTGDB		 PBM
Weirauch et al.(2014)
pTH5067 		0.912 0.962
TFAP4
M02776_2.00 		Homo sapiens
AWCAGCTGWY
RWCAGCTGWT		 SELEX
Jolma et al.(2013)
TFAP4_1 		0.912 0.962
TFAP4
M02777_2.00 		Homo sapiens
AWCAGCTGWT
AWCAGCTGWT		 SELEX
Jolma et al.(2013)
TFAP4_2 		0.912 0.962
TFAP4
M04066_2.00 		Homo sapiens
VHCAKVTGDB
VHCABMTGDB		 SELEX
Yin et al.(2017)
TFAP4_eDBD_HT-SELEX_1 		0.912 0.962
TFAP4
M04067_2.00 		Homo sapiens
VWCAGCTGWB
VWCAGCTGWB		 SELEX
Yin et al.(2017)
TFAP4_eDBD_HT-SELEX_2 		0.912 0.962
TFAP4
M04070_2.00 		Homo sapiens
RHCAYVTGDB
VHCABRTGDY		 SELEX
Yin et al.(2017)
TFAP4_FL_HT-SELEX_1 		0.912 0.962
TFAP4
M04071_2.00 		Homo sapiens
VHCAGCTGDB
VHCAGCTGDB		 SELEX
Yin et al.(2017)
TFAP4_FL_HT-SELEX_2 		0.912 0.962
TFAP4
M08712_2.00 		Homo sapiens
VMNCAGCTGR
YCAGCTGNKB		 Misc
Kulakovskiy et al.(2013)
TFAP4_HUMAN.H11MO.0.A 		0.912 0.962
TFAP4
M09453_2.00 		Homo sapiens
NVHCAGCTGD
HCAGCTGDBN		 Misc
Heinz et al.(2010)
AML-Tfap4_GSE45738 		0.912 0.962
TFAP4
M09802_2.00 		Homo sapiens
MNGNCHVCAGCTGDBBBW
WVVVHCAGCTGBDGNCNK		 Transfac
Matys et al.(2006)
V$AP4_01 		0.912 0.962
TFAP4
M09803_2.00 		Homo sapiens
NNSAGCTGHB
VDCAGCTSNN		 Transfac
Matys et al.(2006)
V$AP4_Q5 		0.912 0.962
TFAP4
M09804_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AP4_Q6_01 		0.912 0.962
TFAP4
M09805_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AP4_Q6_02 		0.912 0.962
TFAP4
M09806_2.00 		Homo sapiens
NVCAGCTGHB
VDCAGCTGBN		 Transfac
Matys et al.(2006)
V$AP4_Q6 		0.912 0.962
TFAP4
M04068_2.00 		Homo sapiens
DHCABMTGDN
NHCAKVTGDH		 SELEX
Yin et al.(2017)
TFAP4_eDBD_Methyl-HT-SELEX_1 		0.912 0.962
TFAP4
M04069_2.00 		Homo sapiens
AWCAGCTGWT
AWCAGCTGWT		 SELEX
Yin et al.(2017)
TFAP4_eDBD_Methyl-HT-SELEX_2 		0.912 0.962
TFAP4
M04072_2.00 		Homo sapiens
VHCABVTGDB
VHCABVTGDB		 SELEX
Yin et al.(2017)
TFAP4_FL_Methyl-HT-SELEX_1 		0.912 0.962
TFAP4
M04073_2.00 		Homo sapiens
VHCAGCTGDB
VHCAGCTGDB		 SELEX
Yin et al.(2017)
TFAP4_FL_Methyl-HT-SELEX_2 		0.912 0.962
crp
M03595_2.00 		Drosophila melanogaster
AACAGCTGWT
AWCAGCTGTT		 SELEX
Nitta et al.(2015)
crp_1 		0.845 0.827
crp
M05937_2.00 		Drosophila melanogaster
VAHCAGCTGAY
RTCAGCTGDWB		 B1H
Zhu et al.(2011)
crp_SANGER_10_FBgn0001994 		0.845 0.827
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000004429 bHLH 49 100

Links

Other bHLH family TFs
Other Tetraodon nigroviridis TFs

100 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_04236 Capronia coronata A1O1_04236 I
A1O3_01186 Capronia epimyces A1O3_01186 I
A1O5_08179 Cladophialophora psammophila A1O5_08179 I
A1O7_02602 Cladophialophora yegresii A1O7_02602 I
A1O9_06998 Exophiala aquamarina A1O9_06998 I
ACLA_024940 Aspergillus clavatus CADACLAG00003063 I
AFUA_1G10580 Aspergillus fumigatus CADAFUAG00007238 I
ANIA_01217 Aspergillus nidulans CADANIAG00001407 D
ARB_03169 Arthroderma benhamiae ARB_03169 I
BDDG_03637 Blastomyces dermatitidis BDDG_03637 I
CADAFLAG00008334 Aspergillus flavus CADAFLAG00008334 I
CADANGAG00006576 Aspergillus niger CADANGAG00006576 I
CADAORAG00009146 Aspergillus oryzae CADAORAG00009146 I
CGGC5_1994 Colletotrichum gloeosporioides CGGC5_1994 I
CIMG_08965 Coccidioides immitis CIMG_08965 I
CPC735_014230 Coccidioides posadasii CPC735_014230 I
EPUS_07013 Endocarpon pusillum EPUS_07013 I
EURHEDRAFT_518531 Aspergillus ruber EURHEDRAFT_518531 I
fgenesh1_pg.00083_#_673 Aspergillus carbonarius fgenesh1_pg.00083_#_673 I
G647_05771 Cladophialophora carrionii G647_05771 I
H101_06311 Trichophyton interdigitale H101_06311 I
H102_03894 Trichophyton rubrum H102_03894 I
H105_03921 Trichophyton soudanense H105_03921 I
HCBG_03212 Histoplasma capsulatum HCBG_03212 I
HMPREF1120_08383 Exophiala dermatitidis HMPREF1120_08383 I
HMPREF1541_00873 Cyphellophora europaea HMPREF1541_00873 I
MCYG_03787 Microsporum canis MCYG_03787 I
MCYG_03787 Arthroderma otae MCYG_03787 I
MGYG_03394 Microsporum gypseum MGYG_03394 I
NFIA_015070 Neosartorya fischeri CADNFIAG00000868 I
PAAG_02895 Paracoccidioides sp lutzii PAAG_02895 I
PABG_03356 Paracoccidioides brasiliensis PABG_03356 I
Pc16g04210 Penicillium chrysogenum Pc16g04210 I
PCH_Pc16g04210 Penicillium rubens PCH_Pc16g04210 I
PDE_07199 Penicillium oxalicum PDE_07199 I
PDIP_31370 Penicillium digitatum PDIP_31370 I
PEX1_030790 Penicillium expansum PEX1_030790 I
PFICI_01477 Pestalotiopsis fici PFICI_01477 I
PITC_039850 Penicillium italicum PITC_039850 I
PMAA_043800 Penicillium marneffei PMAA_043800 I
PMAA_043800 Talaromyces marneffei PMAA_043800 I
PV04_02769 Capronia semiimmersa PV04_02769 I
PV05_06344 Exophiala xenobiotica PV05_06344 I
PV06_07565 Exophiala oligosperma PV06_07565 I
PV08_07384 Exophiala spinifera PV08_07384 I
PV08_07787 Exophiala spinifera PV08_07787 I
PV10_01375 Exophiala mesophila PV10_01375 I
PV11_05046 Exophiala sideris PV11_05046 I
PVAR5_8900 Byssochlamys spectabilis PVAR5_8900 I
TEQG_04003 Trichophyton equinum TEQG_04003 I
TESG_07530 Trichophyton tonsurans TESG_07530 I
TRV_02965 Trichophyton verrucosum TRV_02965 I
TSTA_074790 Talaromyces stipitatus TSTA_074790 I
U727_00434030131 Penicillium solitum U727_00434030131 I
UREG_03403 Uncinocarpus reesii UREG_03403 I
Z517_04522 Fonsecaea pedrosoi Z517_04522 I
Z518_01899 Rhinocladiella mackenziei Z518_01899 I
Z519_09403 Cladophialophora bantiana Z519_09403 I