CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

olig2 *(Tetraodon nigroviridis)* bHLH
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00010 (HLH)	IPR001092	ENSTNIG00000003641	T037711_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
OLIG2 M02812_2.00	Homo sapiens	AMCATATGBY	RVCATATGKT	SELEX Jolma et al.(2013) OLIG2_1	0.870	0.945
OLIG2 M02813_2.00	Homo sapiens	AMCATATGBY	RVCATATGKT	SELEX Jolma et al.(2013) OLIG2_2	0.870	0.945
OLIG2 M04223_2.00	Homo sapiens	AACAKMTGTB	VACAKMTGTT	SELEX Yin et al.(2017) OLIG2_eDBD_HT-SELEX_1	0.870	0.945
OLIG2 M04224_2.00	Homo sapiens	AMCATATGKY	RMCATATGKT	SELEX Yin et al.(2017) OLIG2_eDBD_HT-SELEX_2	0.870	0.945
OLIG2 M08742_2.00	Homo sapiens	NDNVHNRVVRVCAGMTGK	MCAKCTGBYBBYNDBNHN	Misc Kulakovskiy et al.(2013) OLIG2_HUMAN.H11MO.0.B	0.870	0.945
Olig2 M08771_2.00	Mus musculus	NDNVHNRVVRVCAGMTGK	MCAKCTGBYBBYNDBNHN	Misc Kulakovskiy et al.(2013) OLIG2_MOUSE.H11MO.0.A	0.870	0.945
Olig2 M09477_2.00	Mus musculus	RVCAKMTGKH	DMCAKMTGBY	Misc Heinz et al.(2010) Neuron-Olig2_GSE30882	0.870	0.945
OLIG2 M04225_2.00	Homo sapiens	AACAKMTGKB	VMCAKMTGTT	SELEX Yin et al.(2017) OLIG2_eDBD_Methyl-HT-SELEX_1	0.870	0.945
OLIG2 M04226_2.00	Homo sapiens	AMCATATGKT	AMCATATGKT	SELEX Yin et al.(2017) OLIG2_eDBD_Methyl-HT-SELEX_2	0.870	0.945
Olig3 M01745_2.00	Mus musculus	NWAHHATANNN	NNNTATDDTWN	PBM Weirauch et al.(2014) pTH5164	0.870	0.927
OLIG3 M02798_2.00	Homo sapiens	AMCATATGBY	RVCATATGKT	SELEX Jolma et al.(2013) OLIG3_1	0.870	0.927
OLIG3 M04175_2.00	Homo sapiens	RMCATATGSY	RSCATATGKY	SELEX Yin et al.(2017) OLIG3_FL_HT-SELEX	0.870	0.927
OLIG3 M04171_2.00	Homo sapiens	RMCATATGSY	RSCATATGKY	SELEX Yin et al.(2017) OLIG3_eDBD_HT-SELEX_1	0.870	0.927
OLIG3 M04172_2.00	Homo sapiens	AACAKMTGBT	AVCAKMTGTT	SELEX Yin et al.(2017) OLIG3_eDBD_HT-SELEX_2	0.870	0.927
OLIG3 M04176_2.00	Homo sapiens	RMCATATGGY	RCCATATGKY	SELEX Yin et al.(2017) OLIG3_FL_Methyl-HT-SELEX	0.870	0.927
OLIG3 M04173_2.00	Homo sapiens	RMCATATGSY	RSCATATGKY	SELEX Yin et al.(2017) OLIG3_eDBD_Methyl-HT-SELEX_1	0.870	0.927
OLIG3 M04174_2.00	Homo sapiens	VACAKMTGKY	RMCAKMTGTB	SELEX Yin et al.(2017) OLIG3_eDBD_Methyl-HT-SELEX_2	0.870	0.927
For this family, TFs with SR scores > 0.838* will likely have a similar motif*