CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
neurod2
(
Takifugu rubripes
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSTRUG00000012238
T037886_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NEUROD2
M02795_2.00
Homo sapiens
RVCATATGKY
RMCATATGBY
SELEX
Jolma et al.(2013)
NEUROD2_1
0.870
0.865
NEUROD2
M04160_2.00
Homo sapiens
RVCATATGKY
RMCATATGBY
SELEX
Yin et al.(2017)
NEUROD2_FL_HT-SELEX
0.870
0.865
NEUROD2
M08737_2.00
Homo sapiens
RRCAGMTGG
CCAKCTGYY
Misc
Kulakovskiy et al.(2013)
NDF2_HUMAN.H11MO.0.B
0.870
0.865
Neurod2
M08770_2.00
Mus musculus
RVCAGATGGB
VCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF2_MOUSE.H11MO.0.A
0.870
0.865
NEUROD2
M04161_2.00
Homo sapiens
RMCATATGBY
RVCATATGKY
SELEX
Yin et al.(2017)
NEUROD2_FL_Methyl-HT-SELEX
0.870
0.865
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTRUP00000030987
bHLH
105
157
RRMKANTRERIRMHDLNSALDNLRKVVPCYSKTQKLSKIETLRLAKNYILTLG
Links
Other
bHLH
family TFs
Other
Takifugu rubripes
TFs
64 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R006139
Calypte anna
Aan_R006139
I
0.870
Afo_R010307
Aptenodytes forsteri
Afo_R010307
I
0.870
Alligator_sinensis_CCG020800.1
Alligator sinensis
Alligator_sinensis_CCG020800.1
I
0.870
BGLB013872
Biomphalaria glabrata
BGLB013872
I
0.844
Cmyd_10015861
Chelonia mydas
Cmyd_10015861
I
0.870
ENSAMEG00000003939
Ailuropoda melanoleuca
ENSAMEG00000003939
I
0.870
ENSAMXG00000024826
Astyanax mexicanus
ENSAMXG00000024826
I
0.890
ENSBTAP00000005381-D1
Bos grunniens
ENSBTAP00000005381-D1
I
0.870
ENSCPOG00000002240
Cavia porcellus
ENSCPOG00000002240
I
0.870
ENSCSAG00000019039
Chlorocebus sabaeus
ENSCSAG00000019039
I
0.870
ENSFALG00000000552
Ficedula albicollis
ENSFALG00000000552
I
0.870
ENSGALG00000028276
Gallus gallus
ENSGALG00000028276
I
0.870
ENSGMOG00000000168
Gadus morhua
ENSGMOG00000000168
I
0.890
ENSGMOG00000007437
Gadus morhua
ENSGMOG00000007437
I
0.914
ENSLACG00000016624
Latimeria chalumnae
ENSLACG00000016624
I
0.870
ENSLOCG00000017518
Lepisosteus oculatus
ENSLOCG00000017518
I
0.890
ENSMPUG00000020084
Mustela putorius furo
ENSMPUG00000020084
I
0.870
ENSNLEG00000000900
Nomascus leucogenys
ENSNLEG00000000900
I
0.870
ENSOARG00000011334
Ovis aries
ENSOARG00000011334
I
0.870
ENSONIG00000020663
Oreochromis niloticus
ENSONIG00000020663
I
0.914
ENSONIG00000020931
Oreochromis niloticus
ENSONIG00000020931
I
0.890
ENSPANG00000021818
Papio anubis
ENSPANG00000021818
I
0.870
ENSPFOG00000019942
Poecilia formosa
ENSPFOG00000019942
I
0.890
ENSPFOG00000020401
Poecilia formosa
ENSPFOG00000020401
I
0.914
ENSPPYG00000008486
Pongo abelii
ENSPPYG00000008486
I
0.870
ENSPSIG00000001535
Pelodiscus sinensis
ENSPSIG00000001535
I
0.870
ENSSTOG00000020820
Ictidomys tridecemlineatus
ENSSTOG00000020820
I
0.870
ENSXMAG00000019741
Xiphophorus maculatus
ENSXMAG00000019741
I
0.890
ENSXMAG00000019847
Xiphophorus maculatus
ENSXMAG00000019847
I
0.914
Gfo_R016263
Geospiza fortis
Gfo_R016263
I
0.870
Myotis_brandtii_Neurod2_10030393
Myotis brandtii
Myotis_brandtii_Neurod2_10030393
I
0.870
NEUROD2
Takifugu rubripes
ENSTRUG00000016237
I
0.890
NEUROD2
Taeniopygia guttata
ENSTGUG00000016747
I
0.870
neurod2
Tetraodon nigroviridis
ENSTNIG00000001440
I
0.914
NEUROD2
Tetraodon nigroviridis
ENSTNIG00000011718
I
0.890
neurod2
Takifugu rubripes
ENSTRUG00000000599
I
0.914
NEUROD2
Canis familiaris
ENSCAFG00000016407
I
0.870
NEUROD2
Tursiops truncatus
ENSTTRG00000007210
I
0.870
NEUROD2
Anolis carolinensis
ENSACAG00000017561
I
0.870
neurod2
Xenopus tropicalis
XB-GENE-1008512
I
0.890
NEUROD2
Callithrix jacchus
ENSCJAG00000008704
I
0.870
NEUROD2
Bos taurus
ENSBTAG00000004119
I
0.870
NEUROD2
Gorilla gorilla
ENSGGOG00000000493
I
0.870
neurod2
Danio rerio
ENSDARG00000016854
I
0.890
NEUROD2
Dasypus novemcinctus
ENSDNOG00000013872
I
0.870
NEUROD2
Equus caballus
ENSECAG00000020811
I
0.870
NEUROD2
Felis catus
ENSFCAG00000027653
I
0.870
NEUROD2
Homo sapiens
ENSG00000171532
D
0.870
neurod2
Gasterosteus aculeatus
ENSGACG00000006028
I
0.914
NEUROD2
Gasterosteus aculeatus
ENSGACG00000008918
I
0.890
NEUROD2
Pteropus vampyrus
ENSPVAG00000008509
I
0.870
NEUROD2
Loxodonta africana
ENSLAFG00000029558
I
0.870
NEUROD2
Macaca mulatta
ENSMMUG00000001404
I
0.870
Neurod2
Mus musculus
ENSMUSG00000038255
D
0.870
NEUROD2
Ornithorhynchus anatinus
ENSOANG00000003622
I
0.870
NEUROD2
Oryctolagus cuniculus
ENSOCUG00000023536
I
0.870
NEUROD2
Otolemur garnettii
ENSOGAG00000010543
I
0.870
NEUROD2
Ochotona princeps
ENSOPRG00000013289
I
0.870
NEUROD2
Oryzias latipes
ENSORLG00000003441
I
0.890
neurod2
Oryzias latipes
ENSORLG00000008303
I
0.914
NEUROD2
Pan troglodytes
ENSPTRG00000009094
I
0.870
Ocbimv22021915m.g
Octopus bimaculoides
Ocbimv22021915m.g
I
0.847
Ogr16176
Ophisaurus gracilis
Ogr16176
I
0.870
Pvit_07639
Pogona vitticeps
Pvit_07639
I
0.870