ENSXMAG00000020272 (Xiphophorus maculatus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSXMAG00000020272 T038211_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NEUROD1
M04148_2.00 		Homo sapiens
RMCATATGKYVNNNTAWTT
AAWTANNNBRMCATATGKY		 SELEX
Yin et al.(2017)
NEUROD1_FL_HT-SELEX 		0.880 0.827
NEUROD1
M08057_2.00 		Homo sapiens
NNVCAGATGGNNN
NNNCCATCTGBNN		 ChIP-seq
Mathelier et al.(2014)
MA1109.1 		0.880 0.827
NEUROD1
M08735_2.00 		Homo sapiens
RVCAGATGGY
RCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF1_HUMAN.H11MO.0.A 		0.880 0.827
Neurod1
M08764_2.00 		Mus musculus
RVCAGATGGY
RCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF1_MOUSE.H11MO.0.A 		0.880 0.827
Neurod1
M09474_2.00 		Mus musculus
RVCAGATGGY
RCCATCTGBY		 Misc
Heinz et al.(2010)
Islet-NeuroD1_GSE30298 		0.880 0.827
NEUROD1
M09873_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NEUROD_01 		0.880 0.827
NEUROD1
M09874_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NEUROD_02 		0.880 0.827
NEUROD1
M04149_2.00 		Homo sapiens
RVCATATGBYVYNBTAWTW
WAWTAVNRBRVCATATGBY		 SELEX
Yin et al.(2017)
NEUROD1_FL_Methyl-HT-SELEX 		0.880 0.827
NEUROD2
M02795_2.00 		Homo sapiens
RVCATATGKY
RMCATATGBY		 SELEX
Jolma et al.(2013)
NEUROD2_1 		0.845 0.808
NEUROD2
M04160_2.00 		Homo sapiens
RVCATATGKY
RMCATATGBY		 SELEX
Yin et al.(2017)
NEUROD2_FL_HT-SELEX 		0.845 0.808
NEUROD2
M08737_2.00 		Homo sapiens
RRCAGMTGG
CCAKCTGYY		 Misc
Kulakovskiy et al.(2013)
NDF2_HUMAN.H11MO.0.B 		0.845 0.808
Neurod2
M08770_2.00 		Mus musculus
RVCAGATGGB
VCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF2_MOUSE.H11MO.0.A 		0.845 0.808
NEUROD2
M04161_2.00 		Homo sapiens
RMCATATGBY
RVCATATGKY		 SELEX
Yin et al.(2017)
NEUROD2_FL_Methyl-HT-SELEX 		0.845 0.808
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSXMAP00000020319 bHLH 94 146

Links

Other bHLH family TFs
Other Xiphophorus maculatus TFs

269 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
csin111886 Clonorchis sinensis csin111886 N 0.000
ECANG7_05482 Echinococcus canadensis ECANG7_05482 N 0.000
EmuJ_000768400 Echinococcus multilocularis EmuJ_000768400 N 0.000
HDID_0001034201 Hymenolepis diminuta HDID_0001034201 N 0.000
HmN_000739900 Hymenolepis microstoma HmN_000739900 N 0.000
HNAJ_0001307701 Hymenolepis nana HNAJ_0001307701 N 0.000
maker-nMf.1.1.scaf16231-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf16231-snap-gene-0.4 N 0.000
MCOS_0000726601 Mesocestoides corti MCOS_0000726601 N 0.000
MhA1_Contig993.frz3.gene8 Meloidogyne hapla MhA1_Contig993.frz3.gene8 N 0.000
Minc15230 Meloidogyne incognita Minc15230 N 0.000
SSLN_0000025201 Schistocephalus solidus SSLN_0000025201 N 0.000
T265_08622 Opisthorchis viverrini T265_08622 N 0.000
TASK_0000901601 Taenia asiatica TASK_0000901601 N 0.000
TTAC_0000435501 Hydatigera taeniaeformis TTAC_0000435501 N 0.000