CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LPERR02G12290
(
Leersia perrieri
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
LPERR02G12290
T040956_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK18401.1
M01126_2.00
Cannabis sativa
NNNVCACGTGBN
NVCACGTGBNNN
PBM
Lambert et al.(2019)
pTH11272
0.863
0.784
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LPERR02G12290.1
bHLH
43
93
RKVQKADREKMRRDKLNEQFQELGGTLDPDRPRNDKATILGDAIQMLKDLT
LPERR02G12290.2
bHLH
43
93
RKVQKADREKMRRDKLNEQFQELGGTLDPDRPRNDKATILGDAIQMLKDLT
Links
Other
bHLH
family TFs
Other
Leersia perrieri
TFs
60 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_186054
Agaricus bisporus
AGABI2DRAFT_186054
N
BN946_scf185008.g46
Trametes cinnabarina
BN946_scf185008.g46
N
CC1G_11570
Coprinopsis cinerea
CC1G_11570
N
CERSUDRAFT_112754
Ceriporiopsis subvermispora
CERSUDRAFT_112754
N
CY34DRAFT_799337
Suillus luteus
CY34DRAFT_799337
N
DACRYDRAFT_105815
Dacryopinax sp
DACRYDRAFT_105815
N
fgenesh1_pg.C_scaffold_3000269
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_3000269
N
FOMPIDRAFT_1162733
Fomitopsis pinicola
FOMPIDRAFT_1162733
N
GALMADRAFT_240800
Galerina marginata
GALMADRAFT_240800
N
GYMLUDRAFT_43655
Gymnopus luxurians
GYMLUDRAFT_43655
N
JAAARDRAFT_31242
Jaapia argillacea
JAAARDRAFT_31242
N
K443DRAFT_672070
Laccaria amethystina
K443DRAFT_672070
N
LACBIDRAFT_305537
Laccaria bicolor
LACBIDRAFT_305537
N
M378DRAFT_787408
Amanita muscaria
M378DRAFT_787408
N
M404DRAFT_135916
Pisolithus tinctorius
M404DRAFT_135916
N
M408DRAFT_278207
Serendipita vermifera
M408DRAFT_278207
N
PAXRUDRAFT_131223
Paxillus rubicundulus
PAXRUDRAFT_131223
N
PHLGIDRAFT_281883
Phlebiopsis gigantea
PHLGIDRAFT_281883
N
PILCRDRAFT_7448
Piloderma croceum
PILCRDRAFT_7448
N
PLEOSDRAFT_1113210
Pleurotus ostreatus
PLEOSDRAFT_1113210
N
SCHCODRAFT_269948
Schizophyllum commune
SCHCODRAFT_269948
N
SCLCIDRAFT_137855
Scleroderma citrinum
SCLCIDRAFT_137855
N
SERLA73DRAFT_184665
Serpula lacrymans
SERLA73DRAFT_184665
N