PGSC0003DMG400001918 (Solanum tuberosum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 PGSC0003DMG400001918 T043406_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLH49
M01052_2.00 		Arabidopsis thaliana
NNCACGTGCN
NGCACGTGNN		 PBM
Sullivan et al.(2014)
pTH7309 		0.914 0.980
PK06517.1
M01122_2.00 		Cannabis sativa
NCACGTGC
GCACGTGN		 PBM
Lambert et al.(2019)
pTH10104 		0.914 0.941
gw1.270.82.1
M01758_2.00 		Physcomitrella patens
NCACGTGH
DCACGTGN		 PBM
Weirauch et al.(2014)
pTH8457 		0.902 0.922
BHLH74
M06720_2.00 		Arabidopsis thaliana
SDHSDNDNNCACGTGVNNNNW
WNNNNBCACGTGNNHNHSDHS		 Dap-seq
OMalley et al.(2016)
bHLH74_col_a 		0.902 0.902
BHLH74
M06721_2.00 		Arabidopsis thaliana
CACGTGAY
RTCACGTG		 Dap-seq
OMalley et al.(2016)
bHLH74_colamp_a 		0.902 0.902
BHLH77
M06736_2.00 		Arabidopsis thaliana
NKCACGTGVHNWHNB
VNDWNDBCACGTGMN		 Dap-seq
OMalley et al.(2016)
bHLH77_col_a 		0.902 0.882
BHLH78
M01713_2.00 		Arabidopsis thaliana
GCACGTGC
GCACGTGC		 PBM
Weirauch et al.(2014)
pTH7666 		0.888 0.902
BPE
M01700_2.00 		Arabidopsis thaliana
NCACGTNNN
NNNACGTGN		 PBM
Weirauch et al.(2014)
pTH7290 		0.875 0.863
BPE
M06726_2.00 		Arabidopsis thaliana
NNNNNNNNCACGTGNNNNNWB
VWNNNNNCACGTGNNNNNNNN		 Dap-seq
OMalley et al.(2016)
bHLH31_col 		0.875 0.863
BEE2
M01708_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8094 		0.864 0.824
AT2G18300
M01702_2.00 		Arabidopsis thaliana
NBCACGTGCNNN
NNNGCACGTGVN		 PBM
Weirauch et al.(2014)
pTH7289 		0.864 0.804
AT2G18300
M06729_2.00 		Arabidopsis thaliana
ACTGGT
ACCAGT		 Dap-seq
OMalley et al.(2016)
bHLH64_col_a 		0.864 0.804
PK05923.1
M01121_2.00 		Cannabis sativa
NNNNNNN
NNNNNNN		 PBM
Lambert et al.(2019)
pTH11368 		0.842 0.745
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400004829 bHLH 309 359
PGSC0003DMT400004830 bHLH 309 359

Links

Other bHLH family TFs
Other Solanum tuberosum TFs

902 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000005011 Ailuropoda melanoleuca ENSAMEG00000005011 N
ENSBTAP00000010078-D1 Bos grunniens ENSBTAP00000010078-D1 N
ENSCPOG00000027253 Cavia porcellus ENSCPOG00000027253 N
ENSCSAG00000007968 Chlorocebus sabaeus ENSCSAG00000007968 N
ENSNLEG00000001897 Nomascus leucogenys ENSNLEG00000001897 N
ENSOARG00000004095 Ovis aries ENSOARG00000004095 N
ENSP00000377504 Macaca fascicularis ENSP00000377504 N
ENSPANG00000000284 Papio anubis ENSPANG00000000284 N
ENSPPYG00000009508 Pongo abelii ENSPPYG00000009508 N
ENSSTOG00000028879 Ictidomys tridecemlineatus ENSSTOG00000028879 N
Myotis_brandtii_ZNF414_10012537 Myotis brandtii Myotis_brandtii_ZNF414_10012537 N
Zfp414 Mus musculus ENSMUSG00000073423 N
Zfp414 Rattus norvegicus ENSRNOG00000008378 N
ZNF414 Echinops telfairi ENSETEG00000019716 N
ZNF414 Bos taurus ENSBTAG00000007660 N
ZNF414 Canis familiaris ENSCAFG00000018529 N
ZNF414 Dasypus novemcinctus ENSDNOG00000025224 N
ZNF414 Tursiops truncatus ENSTTRG00000009785 N
ZNF414 Tupaia belangeri ENSTBEG00000004008 N
ZNF414 Equus caballus ENSECAG00000023401 N
ZNF414 Pteropus vampyrus ENSPVAG00000009654 N
ZNF414 Pan troglodytes ENSPTRG00000010427 N
ZNF414 Loxodonta africana ENSLAFG00000021907 N
ZNF414 Felis catus ENSFCAG00000015220 N
ZNF414 Otolemur garnettii ENSOGAG00000003243 N
ZNF414 Oryctolagus cuniculus ENSOCUG00000027412 N
ZNF414 Homo sapiens ENSG00000133250 N
ZNF414 Gorilla gorilla ENSGGOG00000003514 N
ZNF414 Macaca mulatta ENSMMUG00000019918 N
ZNF414 Myotis lucifugus ENSMLUG00000006742 N