CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0005s25240
(
Populus trichocarpa
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
POPTR_0005s25240
T043816_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0005s25240.1
bHLH
317
357
KVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQ
POPTR_0005s25240.2
bHLH
317
357
KVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQ
POPTR_0005s25240.3
bHLH
242
282
KVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQ
Links
Other
bHLH
family TFs
Other
Populus trichocarpa
TFs
233 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gene31621-v1.0-hybrid
Fragaria vesca
gene31621-v1.0-hybrid
N
Lus10011445.g
Linum usitatissimum
Lus10011445.g
N
Lus10035873.g
Linum usitatissimum
Lus10035873.g
N
Lus10037550.g
Linum usitatissimum
Lus10037550.g
N
MDP0000274723
Malus domestica
MDP0000274723
N
SapurV1A.1429s0020
Salix purpurea
SapurV1A.1429s0020
N
TGA1A
Nicotiana sp.
TGA1A_TOBAC
D
TGA1A_TOBAC
Nicotiana tabacum
TGA1A_TOBAC
D