scaffold_101064.1 (Arabidopsis lyrata)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 scaffold_101064.1 T044496_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLH74
M06720_2.00 		Arabidopsis thaliana
SDHSDNDNNCACGTGVNNNNW
WNNNNBCACGTGNNHNHSDHS		 Dap-seq
OMalley et al.(2016)
bHLH74_col_a 		0.914 1.000
BHLH74
M06721_2.00 		Arabidopsis thaliana
CACGTGAY
RTCACGTG		 Dap-seq
OMalley et al.(2016)
bHLH74_colamp_a 		0.914 1.000
gw1.270.82.1
M01758_2.00 		Physcomitrella patens
NCACGTGH
DCACGTGN		 PBM
Weirauch et al.(2014)
pTH8457 		0.914 0.902
BHLH77
M06736_2.00 		Arabidopsis thaliana
NKCACGTGVHNWHNB
VNDWNDBCACGTGMN		 Dap-seq
OMalley et al.(2016)
bHLH77_col_a 		0.914 0.902
BHLH49
M01052_2.00 		Arabidopsis thaliana
NNCACGTGCN
NGCACGTGNN		 PBM
Sullivan et al.(2014)
pTH7309 		0.902 0.922
PK06517.1
M01122_2.00 		Cannabis sativa
NCACGTGC
GCACGTGN		 PBM
Lambert et al.(2019)
pTH10104 		0.902 0.882
BHLH78
M01713_2.00 		Arabidopsis thaliana
GCACGTGC
GCACGTGC		 PBM
Weirauch et al.(2014)
pTH7666 		0.875 0.882
BPE
M01700_2.00 		Arabidopsis thaliana
NCACGTNNN
NNNACGTGN		 PBM
Weirauch et al.(2014)
pTH7290 		0.862 0.804
BPE
M06726_2.00 		Arabidopsis thaliana
NNNNNNNNCACGTGNNNNNWB
VWNNNNNCACGTGNNNNNNNN		 Dap-seq
OMalley et al.(2016)
bHLH31_col 		0.862 0.804
PK05923.1
M01121_2.00 		Cannabis sativa
NNNNNNN
NNNNNNN		 PBM
Lambert et al.(2019)
pTH11368 		0.855 0.784
BEE2
M01708_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8094 		0.852 0.765
AT2G18300
M01702_2.00 		Arabidopsis thaliana
NBCACGTGCNNN
NNNGCACGTGVN		 PBM
Weirauch et al.(2014)
pTH7289 		0.852 0.745
AT2G18300
M06729_2.00 		Arabidopsis thaliana
ACTGGT
ACCAGT		 Dap-seq
OMalley et al.(2016)
bHLH64_col_a 		0.852 0.745
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold_101064.1 bHLH 211 261

Links

Other bHLH family TFs
Other Arabidopsis lyrata TFs

905 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O9_12743 Exophiala aquamarina A1O9_12743 N 0.000
CADAFLAG00000379 Aspergillus flavus CADAFLAG00000379 N 0.000
CFIO01_05872 Colletotrichum fioriniae CFIO01_05872 N 0.000
e_gw1.00086.95.1 Aspergillus carbonarius e_gw1.00086.95.1 N 0.000
FFUJ_14523 Fusarium fujikuroi FFUJ_14523 N 0.000
fgenesh1_pg.00082_#_23 Aspergillus carbonarius fgenesh1_pg.00082_#_23 N 0.000
fgenesh1_pg.00855_#_16 Aspergillus carbonarius fgenesh1_pg.00855_#_16 N 0.000
gw1.00643.3.1 Aspergillus carbonarius gw1.00643.3.1 N 0.000
M437DRAFT_47167 Aureobasidium melanogenum M437DRAFT_47167 N 0.000
MANI_026073 Metarhizium anisopliae MANI_026073 N 0.000
OIDMADRAFT_121649 Oidiodendron maius OIDMADRAFT_121649 N 0.000
PV06_05937 Exophiala oligosperma PV06_05937 N 0.000
PV11_07373 Exophiala sideris PV11_07373 N 0.000
PVAR5_2965 Byssochlamys spectabilis PVAR5_2965 N 0.000
TRIREDRAFT_103751 Trichoderma reesei TRIREDRAFT_103751 N 0.000
X797_005153 Metarhizium robertsii X797_005153 N 0.000