SMAR007739 (Strigamia maritima)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 SMAR007739 T044922_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Bhlhe22
M01729_2.00 		Mus musculus
NVCATATGGN
NCCATATGBN		 PBM
Weirauch et al.(2014)
pTH5267 		0.914 0.981
BHLHE22
M02804_2.00 		Homo sapiens
NAVCATATGBTN
NAVCATATGBTN		 SELEX
Jolma et al.(2013)
BHLHE22_1 		0.914 0.981
BHLHE23
M02784_2.00 		Homo sapiens
RVCATATGBY
RVCATATGBY		 SELEX
Jolma et al.(2013)
BHLHE23_1 		0.914 0.981
BHLHE22
M04199_2.00 		Homo sapiens
AVCATATGBY
RVCATATGBT		 SELEX
Yin et al.(2017)
BHLHE22_eDBD_HT-SELEX 		0.914 0.981
BHLHE23
M04108_2.00 		Homo sapiens
AVCATATGBY
RVCATATGBT		 SELEX
Yin et al.(2017)
BHLHE23_eDBD_HT-SELEX 		0.914 0.981
BHLHE23
M04110_2.00 		Homo sapiens
RVCATATGBY
RVCATATGBY		 SELEX
Yin et al.(2017)
BHLHE23_FL_HT-SELEX 		0.914 0.981
BHLHE22
M04200_2.00 		Homo sapiens
AVCATATGBY
RVCATATGBT		 SELEX
Yin et al.(2017)
BHLHE22_eDBD_Methyl-HT-SELEX 		0.914 0.981
BHLHE23
M04109_2.00 		Homo sapiens
AVCATATGBY
RVCATATGBT		 SELEX
Yin et al.(2017)
BHLHE23_eDBD_Methyl-HT-SELEX 		0.914 0.981
BHLHE23
M04111_2.00 		Homo sapiens
RVCATATGBY
RVCATATGBY		 SELEX
Yin et al.(2017)
BHLHE23_FL_Methyl-HT-SELEX 		0.914 0.981
Oli
M03618_2.00 		Drosophila melanogaster
AMCATATGKY
RMCATATGKT		 SELEX
Nitta et al.(2015)
Oli_1 		0.890 0.944
Oli
M05985_2.00 		Drosophila melanogaster
SACCATATGKY
RMCATATGGTS		 B1H
Zhu et al.(2011)
Oli_da_SANGER_5_1_FBgn0032651 		0.890 0.944
Oli
M05986_2.00 		Drosophila melanogaster
AHSBNRCCATMTGKY
RMCAKATGGYNVSDT		 B1H
Zhu et al.(2011)
Oli_da_SANGER_5_2_FBgn0032651 		0.890 0.944
Oli
M05987_2.00 		Drosophila melanogaster
MCATCTGKY
RMCAGATGK		 B1H
Zhu et al.(2011)
Oli_da_SANGER_5_3_FBgn0032651 		0.890 0.944
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMAR007739-PA bHLH 114 181

Links

Other bHLH family TFs
Other Strigamia maritima TFs

147 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30055.m001550 Ricinus communis 30055.m001550 I
AMTR_s00031p00017860 Amborella trichopoda AMTR_s00031p00017860 I
cassava13378.valid.m1 Manihot esculenta cassava13378.valid.m1 I
Ca_07057 Cicer arietinum Ca_07057 I
Cla008794 Citrullus lanatus Cla008794 I
Cucsa.385130 Cucumis sativus Cucsa.385130 N
Eucgr.J00491 Eucalyptus grandis Eucgr.J00491 I
evm.TU.supercontig_32.14 Carica papaya evm.TU.supercontig_32.14 I
gene21797-v1.0-hybrid Fragaria vesca gene21797-v1.0-hybrid I
GLYMA11G19026 Glycine max GLYMA11G19026 I
GLYMA12G09430 Glycine max GLYMA12G09430 I
Gorai.006G111800 Gossypium raimondii Gorai.006G111800 I
GSMUA_Achr2G06770_001 Musa acuminata GSMUA_Achr2G06770_001 I
Lus10034296.g Linum usitatissimum Lus10034296.g I
Lus10041475.g Linum usitatissimum Lus10041475.g I
mgf001395m Mimulus guttatus mgf001395m I
MTR_2g086420 Medicago truncatula MTR_2g086420 I
PK07387.1 Cannabis sativa PK07387.1 I
Pm001317 Prunus mume Pm001317 I
POPTR_0009s16590 Populus trichocarpa POPTR_0009s16590 I
PRUPE_ppa004537mg Prunus persica PRUPE_ppa004537mg I
SapurV1A.0374s0050 Salix purpurea SapurV1A.0374s0050 I
Sb04g006500 Sorghum bicolor Sb04g006500 I
TCM_041421 Theobroma cacao TCM_041421 I
TGA9 Vitis vinifera VIT_06s0080g00360 I