CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TT8
(
Vitis vinifera
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
VIT_07s0104g00090
T046179_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK09702.1
M01124_2.00
Cannabis sativa
GCACGTGV
BCACGTGC
PBM
Lambert et al.(2019)
pTH11374
0.914
0.980
MYC2
M01699_2.00
Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8083
0.840
0.633
MYC4
M01707_2.00
Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8260
0.840
0.633
MYC3
M01712_2.00
Arabidopsis thaliana
MWYGTGNNNN
NNNNCACRWK
PBM
Weirauch et al.(2014)
pTH8854
0.840
0.633
PK18474.1
M01127_2.00
Cannabis sativa
NRCACGTGCN
NGCACGTGYN
PBM
Lambert et al.(2019)
pTH10273
0.840
0.633
PK18474.1
M01768_2.00
Cannabis sativa
NCACGWK
MWCGTGN
PBM
Weirauch et al.(2014)
pTH9589
0.840
0.633
OS01G0235700
M09894_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BHLH66_01
0.840
0.612
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VIT_07s0104g00090.t01
bHLH
487
535
SANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLR
Links
Other
bHLH
family TFs
Other
Vitis vinifera
TFs
403 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_196071
Agaricus bisporus
AGABI2DRAFT_196071
N
CC1G_02249
Coprinopsis cinerea
CC1G_02249
N
CERSUDRAFT_114298
Ceriporiopsis subvermispora
CERSUDRAFT_114298
N
CY34DRAFT_93076
Suillus luteus
CY34DRAFT_93076
N
DICSQDRAFT_15489
Dichomitus squalens
DICSQDRAFT_15489
N
EuGene3001004
Heterobasidion annosum
EuGene3001004
N
FOMPIDRAFT_1039929
Fomitopsis pinicola
FOMPIDRAFT_1039929
N
HETIRDRAFT_459509
Heterobasidion irregulare
HETIRDRAFT_459509
N
K443DRAFT_7805
Laccaria amethystina
K443DRAFT_7805
N
LACBIDRAFT_293210
Laccaria bicolor
LACBIDRAFT_293210
N
M413DRAFT_341828
Hebeloma cylindrosporum
M413DRAFT_341828
N
M422DRAFT_257193
Sphaerobolus stellatus
M422DRAFT_257193
N
Moror_6229
Moniliophthora roreri
Moror_6229
N
Moror_8166
Moniliophthora roreri
Moror_8166
N
PLEOSDRAFT_1089374
Pleurotus ostreatus
PLEOSDRAFT_1089374
N
POSPLDRAFT_105384
Postia placenta
POSPLDRAFT_105384
N
SCHCODRAFT_82694
Schizophyllum commune
SCHCODRAFT_82694
N