CBF1 (Saccharomyces cerevisiae)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 YJR060W T046367_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CBF1
M00010_2.00		 Saccharomyces cerevisiae
NDCACGTGANN
NNTCACGTGHN		 PBM
Badis et al.(2008)
CBF1_2160		 (Direct) (Direct)
CBF1
M00374_2.00		 Saccharomyces cerevisiae
NCACGTGAY
RTCACGTGN		 PBM
Berger et al.(2006)
Cbf1		 (Direct) (Direct)
CBF1
M01520_2.00		 Saccharomyces cerevisiae
CACGTGAYH
DRTCACGTG		 PBM
Zhu et al.(2009)
Cbf1		 (Direct) (Direct)
CBF1
M07440_2.00		 Saccharomyces cerevisiae
TCACGTGH
DCACGTGA		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0281.1		 (Direct) (Direct)
CBF1
M08485_2.00		 Saccharomyces cerevisiae
NCAYRTGN
NCAYRTGN		 Misc
DeBoer et al.(2011)
YJR060W_1347		 (Direct) (Direct)
CBF1
M09483_2.00		 Saccharomyces cerevisiae
KCACGTGAYN
NRTCACGTGM		 Misc
Heinz et al.(2010)
Yeast-Cbf1_GSE29506		 (Direct) (Direct)
CBF1
M09897_2.00		 Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$CBF1_02		 (Direct) (Direct)
CBF1
M09898_2.00		 Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$CBF1_03		 (Direct) (Direct)
CBF1
M09899_2.00		 Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$CBF1_04		 (Direct) (Direct)
CBF1
M09900_2.00		 Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$CBF1_B		 (Direct) (Direct)
CBF1
M09901_2.00		 Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$CBF1_Q6		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.838 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00010_2.00 bHLH 51 99
M00374_2.00 bHLH 223 271
M01520_2.00 bHLH 223 271

DNA Binding Domains

Protein ID Domain From To Sequence
YJR060W bHLH 223 271

Links

Other bHLH family TFs
Other Saccharomyces cerevisiae TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AFAF002227 Anopheles farauti AFAF002227 N
AFUN006467 Anopheles funestus AFUN006467 N
AGAP000585 Anopheles gambiae AGAP000585 N
AMAM005389 Anopheles maculatus AMAM005389 N
AMEC019576 Anopheles melas AMEC019576 N
AQUA000854 Anopheles quadriannulatus AQUA000854 N
ASIS013535 Anopheles sinensis ASIS013535 N
ASTEI04402 Anopheles stephensi ASTEI04402 N
GA22516 Drosophila pseudoobscura FBgn0243919 N
GE16131 Drosophila yakuba FBgn0233677 N
GG19479 Drosophila erecta FBgn0111682 N
GH17833 Drosophila grimshawi FBgn0125302 N
GM17578 Drosophila sechellia FBgn0172486 N
mamo Drosophila melanogaster FBgn0267033 D
MDOA007635 Musca domestica MDOA007635 N