Afo_R010643 (Aptenodytes forsteri)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Afo_R010643 T046591_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NEUROD1
M04148_2.00 		Homo sapiens
RMCATATGKYVNNNTAWTT
AAWTANNNBRMCATATGKY		 SELEX
Yin et al.(2017)
NEUROD1_FL_HT-SELEX 		0.914 1.000
NEUROD1
M08057_2.00 		Homo sapiens
NNVCAGATGGNNN
NNNCCATCTGBNN		 ChIP-seq
Mathelier et al.(2014)
MA1109.1 		0.914 1.000
NEUROD1
M08735_2.00 		Homo sapiens
RVCAGATGGY
RCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF1_HUMAN.H11MO.0.A 		0.914 1.000
Neurod1
M08764_2.00 		Mus musculus
RVCAGATGGY
RCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF1_MOUSE.H11MO.0.A 		0.914 1.000
Neurod1
M09474_2.00 		Mus musculus
RVCAGATGGY
RCCATCTGBY		 Misc
Heinz et al.(2010)
Islet-NeuroD1_GSE30298 		0.914 1.000
NEUROD1
M09873_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NEUROD_01 		0.914 1.000
NEUROD1
M09874_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NEUROD_02 		0.914 1.000
NEUROD1
M04149_2.00 		Homo sapiens
RVCATATGBYVYNBTAWTW
WAWTAVNRBRVCATATGBY		 SELEX
Yin et al.(2017)
NEUROD1_FL_Methyl-HT-SELEX 		0.914 1.000
NEUROD2
M02795_2.00 		Homo sapiens
RVCATATGKY
RMCATATGBY		 SELEX
Jolma et al.(2013)
NEUROD2_1 		0.879 0.962
NEUROD2
M04160_2.00 		Homo sapiens
RVCATATGKY
RMCATATGBY		 SELEX
Yin et al.(2017)
NEUROD2_FL_HT-SELEX 		0.879 0.962
NEUROD2
M08737_2.00 		Homo sapiens
RRCAGMTGG
CCAKCTGYY		 Misc
Kulakovskiy et al.(2013)
NDF2_HUMAN.H11MO.0.B 		0.879 0.962
Neurod2
M08770_2.00 		Mus musculus
RVCAGATGGB
VCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF2_MOUSE.H11MO.0.A 		0.879 0.962
NEUROD2
M04161_2.00 		Homo sapiens
RMCATATGBY
RVCATATGKY		 SELEX
Yin et al.(2017)
NEUROD2_FL_Methyl-HT-SELEX 		0.879 0.962
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R010643 bHLH 42 94

Links

Other bHLH family TFs
Other Aptenodytes forsteri TFs

269 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_09292 Capronia coronata A1O1_09292 N 0.000
A1O5_10885 Cladophialophora psammophila A1O5_10885 N 0.000
A1O7_09090 Cladophialophora yegresii A1O7_09090 N 0.000
A1O9_10446 Exophiala aquamarina A1O9_10446 N 0.000
G647_08050 Cladophialophora carrionii G647_08050 N 0.000
HMPREF1120_01469 Exophiala dermatitidis HMPREF1120_01469 N 0.000
PV04_09680 Capronia semiimmersa PV04_09680 N 0.000
PV05_00085 Exophiala xenobiotica PV05_00085 N 0.000
PV06_10613 Exophiala oligosperma PV06_10613 N 0.000
PV07_00036 Cladophialophora immunda PV07_00036 N 0.000
PV08_02169 Exophiala spinifera PV08_02169 N 0.000
PV10_04737 Exophiala mesophila PV10_04737 N 0.000
PV11_03405 Exophiala sideris PV11_03405 N 0.000
Z517_01937 Fonsecaea pedrosoi Z517_01937 N 0.000
Z518_03437 Rhinocladiella mackenziei Z518_03437 N 0.000
Z519_11424 Cladophialophora bantiana Z519_11424 N 0.000