Cmyd_10011949 (Chelonia mydas)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Cmyd_10011949 T047091_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Olig3
M01745_2.00 		Mus musculus
NWAHHATANNN
NNNTATDDTWN		 PBM
Weirauch et al.(2014)
pTH5164 		0.914 1.000
OLIG3
M02798_2.00 		Homo sapiens
AMCATATGBY
RVCATATGKT		 SELEX
Jolma et al.(2013)
OLIG3_1 		0.914 1.000
OLIG3
M04175_2.00 		Homo sapiens
RMCATATGSY
RSCATATGKY		 SELEX
Yin et al.(2017)
OLIG3_FL_HT-SELEX 		0.914 1.000
OLIG3
M04171_2.00 		Homo sapiens
RMCATATGSY
RSCATATGKY		 SELEX
Yin et al.(2017)
OLIG3_eDBD_HT-SELEX_1 		0.914 1.000
OLIG3
M04172_2.00 		Homo sapiens
AACAKMTGBT
AVCAKMTGTT		 SELEX
Yin et al.(2017)
OLIG3_eDBD_HT-SELEX_2 		0.914 1.000
OLIG3
M04176_2.00 		Homo sapiens
RMCATATGGY
RCCATATGKY		 SELEX
Yin et al.(2017)
OLIG3_FL_Methyl-HT-SELEX 		0.914 1.000
OLIG3
M04173_2.00 		Homo sapiens
RMCATATGSY
RSCATATGKY		 SELEX
Yin et al.(2017)
OLIG3_eDBD_Methyl-HT-SELEX_1 		0.914 1.000
OLIG3
M04174_2.00 		Homo sapiens
VACAKMTGKY
RMCAKMTGTB		 SELEX
Yin et al.(2017)
OLIG3_eDBD_Methyl-HT-SELEX_2 		0.914 1.000
OLIG2
M02812_2.00 		Homo sapiens
AMCATATGBY
RVCATATGKT		 SELEX
Jolma et al.(2013)
OLIG2_1 		0.894 0.964
OLIG2
M02813_2.00 		Homo sapiens
AMCATATGBY
RVCATATGKT		 SELEX
Jolma et al.(2013)
OLIG2_2 		0.894 0.964
OLIG2
M04223_2.00 		Homo sapiens
AACAKMTGTB
VACAKMTGTT		 SELEX
Yin et al.(2017)
OLIG2_eDBD_HT-SELEX_1 		0.894 0.964
OLIG2
M04224_2.00 		Homo sapiens
AMCATATGKY
RMCATATGKT		 SELEX
Yin et al.(2017)
OLIG2_eDBD_HT-SELEX_2 		0.894 0.964
OLIG2
M08742_2.00 		Homo sapiens
NDNVHNRVVRVCAGMTGK
MCAKCTGBYBBYNDBNHN		 Misc
Kulakovskiy et al.(2013)
OLIG2_HUMAN.H11MO.0.B 		0.894 0.964
Olig2
M08771_2.00 		Mus musculus
NDNVHNRVVRVCAGMTGK
MCAKCTGBYBBYNDBNHN		 Misc
Kulakovskiy et al.(2013)
OLIG2_MOUSE.H11MO.0.A 		0.894 0.964
Olig2
M09477_2.00 		Mus musculus
RVCAKMTGKH
DMCAKMTGBY		 Misc
Heinz et al.(2010)
Neuron-Olig2_GSE30882 		0.894 0.964
OLIG2
M04225_2.00 		Homo sapiens
AACAKMTGKB
VMCAKMTGTT		 SELEX
Yin et al.(2017)
OLIG2_eDBD_Methyl-HT-SELEX_1 		0.894 0.964
OLIG2
M04226_2.00 		Homo sapiens
AMCATATGKT
AMCATATGKT		 SELEX
Yin et al.(2017)
OLIG2_eDBD_Methyl-HT-SELEX_2 		0.894 0.964
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10011949 bHLH 70 124

Links

Other bHLH family TFs
Other Chelonia mydas TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R009789 Calypte anna Aan_R009789 I 0.914
Afo_R014889 Aptenodytes forsteri Afo_R014889 I 0.914
Alligator_sinensis_CCG012594.1 Alligator sinensis Alligator_sinensis_CCG012594.1 I 0.914
BGLB010755 Biomphalaria glabrata BGLB010755 I 0.847
Brh_R007937 Buceros rhinoceros Brh_R007937 I 0.914
CapteG41307 Capitella teleta CapteG41307 I 0.858
CapteG65387 Capitella teleta CapteG65387 I 0.858
CGI_10019998 Crassostrea gigas CGI_10019998 I 0.867
CGI_10023146 Crassostrea gigas CGI_10023146 I 0.847
Cmyd_10005462 Chelonia mydas Cmyd_10005462 I 0.894
D915_09810 Fasciola hepatica D915_09810 I 0.856
ECPE_0001595001 Echinostoma caproni ECPE_0001595001 I 0.856
ENSAMEG00000015013 Ailuropoda melanoleuca ENSAMEG00000015013 I 0.894
ENSAMEG00000019633 Ailuropoda melanoleuca ENSAMEG00000019633 I 0.914
ENSAMXG00000026066 Astyanax mexicanus ENSAMXG00000026066 I 0.870
ENSAMXG00000026284 Astyanax mexicanus ENSAMXG00000026284 I 0.890
ENSAPLG00000002295 Anas platyrhynchos ENSAPLG00000002295 I 0.914
ENSBTAP00000021340-D1 Bos grunniens ENSBTAP00000021340-D1 I 0.894
ENSCSAG00000000185 Chlorocebus sabaeus ENSCSAG00000000185 I 0.914
ENSCSAG00000018687 Chlorocebus sabaeus ENSCSAG00000018687 I 0.894
ENSDORG00000006743 Dipodomys ordii ENSDORG00000006743 I 0.894
ENSFALG00000012862 Ficedula albicollis ENSFALG00000012862 I 0.914
ENSGALG00000027381 Gallus gallus ENSGALG00000027381 I 0.894
ENSGMOG00000018006 Gadus morhua ENSGMOG00000018006 I 0.890
ENSGMOG00000018584 Gadus morhua ENSGMOG00000018584 I 0.870
ENSLACG00000005047 Latimeria chalumnae ENSLACG00000005047 I 0.914
ENSLACG00000005481 Latimeria chalumnae ENSLACG00000005481 I 0.894
ENSLOCG00000017350 Lepisosteus oculatus ENSLOCG00000017350 I 0.914
ENSLOCG00000017506 Lepisosteus oculatus ENSLOCG00000017506 I 0.870
ENSMEUG00000002914 Macropus eugenii ENSMEUG00000002914 I 0.894
ENSMICG00000004313 Microcebus murinus ENSMICG00000004313 I 0.894
ENSMMUG00000029441 Macaca mulatta ENSMMUG00000029441 I 0.914
ENSMPUG00000001227 Mustela putorius furo ENSMPUG00000001227 I 0.894
ENSMPUG00000018873 Mustela putorius furo ENSMPUG00000018873 I 0.914
ENSNLEG00000019305 Nomascus leucogenys ENSNLEG00000019305 I 0.914
ENSOARG00000002572 Ovis aries ENSOARG00000002572 I 0.914
ENSONIG00000017079 Oreochromis niloticus ENSONIG00000017079 I 0.870
ENSONIG00000020727 Oreochromis niloticus ENSONIG00000020727 I 0.914
ENSP00000356708 Macaca fascicularis ENSP00000356708 I 0.914
ENSP00000356708-D1 Bos grunniens ENSP00000356708-D1 I 0.914
ENSPANG00000006465 Papio anubis ENSPANG00000006465 I 0.914
ENSPANG00000007664 Papio anubis ENSPANG00000007664 I 0.894
ENSPFOG00000004604 Poecilia formosa ENSPFOG00000004604 I 0.914
ENSPFOG00000015805 Poecilia formosa ENSPFOG00000015805 I 0.870
ENSPFOG00000019968 Poecilia formosa ENSPFOG00000019968 I 0.870
ENSPPYG00000011369 Pongo abelii ENSPPYG00000011369 I 0.894
ENSPPYG00000017041 Pongo abelii ENSPPYG00000017041 I 0.914
ENSPSIG00000001778 Pelodiscus sinensis ENSPSIG00000001778 I 0.914
ENSPSIG00000001988 Pelodiscus sinensis ENSPSIG00000001988 I 0.894
ENSSHAG00000007183 Sarcophilus harrisii ENSSHAG00000007183 I 0.914
ENSSTOG00000020214 Ictidomys tridecemlineatus ENSSTOG00000020214 I 0.914
ENSSTOG00000020899 Ictidomys tridecemlineatus ENSSTOG00000020899 I 0.894
ENSXMAG00000001116 Xiphophorus maculatus ENSXMAG00000001116 I 0.870
ENSXMAG00000018245 Xiphophorus maculatus ENSXMAG00000018245 I 0.914
Gfo_R003786 Geospiza fortis Gfo_R003786 I 0.914
LotgiG70673 Lottia gigantea LotgiG70673 I 0.843
Myotis_brandtii_OLIG3_10035715 Myotis brandtii Myotis_brandtii_OLIG3_10035715 I 0.914
Ocbimv22001042m.g Octopus bimaculoides Ocbimv22001042m.g I 0.847
Ogr17936 Ophisaurus gracilis Ogr17936 I 0.894
OLIG2 Canis familiaris ENSCAFG00000028529 I 0.894
OLIG2 Callithrix jacchus ENSCJAG00000009439 I 0.870
OLIG2 Cavia porcellus ENSCPOG00000011590 I 0.894
olig2 Danio rerio ENSDARG00000040946 I 0.870
OLIG2 Dasypus novemcinctus ENSDNOG00000047420 I 0.894
OLIG2 Homo sapiens ENSG00000205927 D 0.894
olig2 Gasterosteus aculeatus ENSGACG00000002152 I 0.870
OLIG2 Gorilla gorilla ENSGGOG00000008780 I 0.894
OLIG2 Loxodonta africana ENSLAFG00000028347 I 0.894
OLIG2 Macaca mulatta ENSMMUG00000017652 I 0.894
OLIG2 Monodelphis domestica ENSMODG00000025338 I 0.894
Olig2 Mus musculus ENSMUSG00000039830 D 0.894
OLIG2 Otolemur garnettii ENSOGAG00000026818 I 0.894
olig2 Oryzias latipes ENSORLG00000010211 I 0.870
OLIG2 Procavia capensis ENSPCAG00000005657 I 0.894
OLIG2 Pan troglodytes ENSPTRG00000013863 I 0.894
Olig2 Rattus norvegicus ENSRNOG00000028658 I 0.894
olig2 Tetraodon nigroviridis ENSTNIG00000000234 I 0.870
olig2 Tetraodon nigroviridis ENSTNIG00000003641 I 0.870
olig2 Takifugu rubripes ENSTRUG00000014944 I 0.870
OLIG3 Bos taurus ENSBTAG00000008749 I 0.914
OLIG3 Canis familiaris ENSCAFG00000000265 I 0.914
OLIG3 Choloepus hoffmanni ENSCHOG00000005165 I 0.914
OLIG3 Cavia porcellus ENSCPOG00000007516 I 0.914
OLIG3 Dasypus novemcinctus ENSDNOG00000042405 I 0.914
Olig3 Dipodomys ordii ENSDORG00000013033 I 0.914
OLIG3 Echinops telfairi ENSETEG00000004562 I 0.914
OLIG3 Felis catus ENSFCAG00000030246 I 0.914
OLIG3 Homo sapiens ENSG00000177468 D 0.914
OLIG3 Gasterosteus aculeatus ENSGACG00000010412 I 0.890
OLIG3 Gallus gallus ENSGALG00000013862 I 0.914
OLIG3 Gorilla gorilla ENSGGOG00000001516 I 0.914
OLIG3 Loxodonta africana ENSLAFG00000005655 I 0.914
OLIG3 Myotis lucifugus ENSMLUG00000026705 I 0.914
OLIG3 Monodelphis domestica ENSMODG00000017418 I 0.914
Olig3 Mus musculus ENSMUSG00000045591 D 0.914
OLIG3 Ornithorhynchus anatinus ENSOANG00000014796 I 0.914
OLIG3 Oryctolagus cuniculus ENSOCUG00000017289 I 0.914
OLIG3 Otolemur garnettii ENSOGAG00000011977 I 0.914
OLIG3 Ochotona princeps ENSOPRG00000003267 I 0.914
OLIG3 Procavia capensis ENSPCAG00000002488 I 0.914
OLIG3 Pan troglodytes ENSPTRG00000018643 I 0.914
Olig3 Rattus norvegicus ENSRNOG00000012057 I 0.914
OLIG3 Sus scrofa ENSSSCG00000004155 I 0.914
OLIG3 Tupaia belangeri ENSTBEG00000014468 I 0.914
OLIG3 Taeniopygia guttata ENSTGUG00000010892 I 0.914
OLIG3 Tetraodon nigroviridis ENSTNIG00000017004 I 0.890
olig3 Xenopus tropicalis XB-GENE-919789 I 0.914
Pvit_10685 Pogona vitticeps Pvit_10685 I 0.894
Pvit_17282 Pogona vitticeps Pvit_17282 I 0.914
Sakowv30018772m.g Saccoglossus kowalevskii Sakowv30018772m.g I 0.847
XP_002938491 Xenopus tropicalis XP_002938491 I 0.870