Ogr07339 (Ophisaurus gracilis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Ogr07339 T047517_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NEUROD1
M04148_2.00 		Homo sapiens
RMCATATGKYVNNNTAWTT
AAWTANNNBRMCATATGKY		 SELEX
Yin et al.(2017)
NEUROD1_FL_HT-SELEX 		0.914 1.000
NEUROD1
M08057_2.00 		Homo sapiens
NNVCAGATGGNNN
NNNCCATCTGBNN		 ChIP-seq
Mathelier et al.(2014)
MA1109.1 		0.914 1.000
NEUROD1
M08735_2.00 		Homo sapiens
RVCAGATGGY
RCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF1_HUMAN.H11MO.0.A 		0.914 1.000
Neurod1
M08764_2.00 		Mus musculus
RVCAGATGGY
RCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF1_MOUSE.H11MO.0.A 		0.914 1.000
Neurod1
M09474_2.00 		Mus musculus
RVCAGATGGY
RCCATCTGBY		 Misc
Heinz et al.(2010)
Islet-NeuroD1_GSE30298 		0.914 1.000
NEUROD1
M09873_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NEUROD_01 		0.914 1.000
NEUROD1
M09874_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NEUROD_02 		0.914 1.000
NEUROD1
M04149_2.00 		Homo sapiens
RVCATATGBYVYNBTAWTW
WAWTAVNRBRVCATATGBY		 SELEX
Yin et al.(2017)
NEUROD1_FL_Methyl-HT-SELEX 		0.914 1.000
NEUROD2
M02795_2.00 		Homo sapiens
RVCATATGKY
RMCATATGBY		 SELEX
Jolma et al.(2013)
NEUROD2_1 		0.879 0.962
NEUROD2
M04160_2.00 		Homo sapiens
RVCATATGKY
RMCATATGBY		 SELEX
Yin et al.(2017)
NEUROD2_FL_HT-SELEX 		0.879 0.962
NEUROD2
M08737_2.00 		Homo sapiens
RRCAGMTGG
CCAKCTGYY		 Misc
Kulakovskiy et al.(2013)
NDF2_HUMAN.H11MO.0.B 		0.879 0.962
Neurod2
M08770_2.00 		Mus musculus
RVCAGATGGB
VCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF2_MOUSE.H11MO.0.A 		0.879 0.962
NEUROD2
M04161_2.00 		Homo sapiens
RMCATATGBY
RVCATATGKY		 SELEX
Yin et al.(2017)
NEUROD2_FL_Methyl-HT-SELEX 		0.879 0.962
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr07339 bHLH 12 64

Links

Other bHLH family TFs
Other Ophisaurus gracilis TFs

269 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL012562 Aedes aegypti AAEL012562 N
AALB004151 Anopheles albimanus AALB004151 N
AARA005712 Anopheles arabiensis AARA005712 N
AATE001068 Anopheles atroparvus AATE001068 N
ACEP20954 Atta cephalotes ACEP20954 I
ACHR008870 Anopheles christyi ACHR008870 N
ACUA003634 Anopheles culicifacies ACUA003634 N
ADAC005680 Anopheles darlingi ADAC005680 N
ADIR007538 Anopheles dirus ADIR007538 N
AEPI008163 Anopheles epiroticus AEPI008163 N
AFAF004824 Anopheles farauti AFAF004824 N
AFUN011810 Anopheles funestus AFUN011810 N
AMEC012294 Anopheles melas AMEC012294 N
AMEM015248 Anopheles merus AMEM015248 N
AMIN011013 Anopheles minimus AMIN011013 N
AQUA011172 Anopheles quadriannulatus AQUA011172 N
ASTEI06385 Anopheles stephensi ASTEI06385 N
CLK Anopheles gambiae AGAP005711 N
CPIJ002146 Culex quinquefasciatus CPIJ002146 N
CpipJ_CPIJ002146 Culex pipiens CpipJ_CPIJ002146 N
GB48028 Apis mellifera GB48028 I
GJ11427 Drosophila virilis FBgn0198685 I
HHAL003628-PA Halyomorpha halys HHAL003628-PA I
HMEL008784 Heliconius melpomene HMEL008784 I
Hsal_05831--XP_394233.3_APIME Harpegnathos saltator Hsal_05831--XP_394233.3_APIME I
ISCW007040 Ixodes scapularis ISCW007040 I
KGM_10878 Danaus plexippus KGM_10878 I
LCUP014936 Lucilia cuprina LCUP014936 I
LLOJ006614 Lutzomyia longipalpis LLOJ006614 I
MCINX000525 Melitaea cinxia MCINX000525 I
PPAI002844 Phlebotomus papatasi PPAI002844 I
RPRC002110 Rhodnius prolixus RPRC002110 I
TC000088 Tribolium castaneum TC000088 I
YQE_03736 Dendroctonus ponderosae YQE_03736 I