Pvit_07548 (Pogona vitticeps)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pvit_07548 T047720_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Usf1
M01732_2.00 		Mus musculus
NRYCACGTGNN
NNCACGTGRYN		 PBM
Weirauch et al.(2014)
pTH4376 		0.914 0.981
USF1
M02792_2.00 		Homo sapiens
RNCACGTGRY
RYCACGTGNY		 SELEX
Jolma et al.(2013)
USF1_1 		0.914 0.981
USF1
M04146_2.00 		Homo sapiens
NVCACGTGVCN
NGBCACGTGBN		 SELEX
Yin et al.(2017)
USF1_FL_HT-SELEX 		0.914 0.981
USF1
M08056_2.00 		Homo sapiens
RGTCACRTGVB
VBCAYGTGACY		 ChIP-seq
Mathelier et al.(2014)
MA0093.2 		0.914 0.981
USF1
M07807_2.00 		Homo sapiens
VGTCACGTGRBSVVV
BBBSVYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
A549_USF1_HudsonAlpha 		0.914 0.981
USF1
M07808_2.00 		Homo sapiens
VVGTCACGTGVBSVS
SBSVBCACGTGACBB		 ChIP-seq
Gerstein et al.(2012)
GM12878_USF1_HudsonAlpha 		0.914 0.981
USF1
M07809_2.00 		Homo sapiens
RGTCACGTGVBSVNN
NNBSVBCACGTGACY		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_USF1_HudsonAlpha 		0.914 0.981
USF1
M07810_2.00 		Homo sapiens
VGTCACGTGRB
VYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
HepG2_USF1_HudsonAlpha 		0.914 0.981
USF1
M07811_2.00 		Homo sapiens
NVGTCACGTGVSSV
BSSBCACGTGACBN		 ChIP-seq
Gerstein et al.(2012)
K562_USF1_HudsonAlpha 		0.914 0.981
USF1
M08733_2.00 		Homo sapiens
VGTCACGTGVBS
SVBCACGTGACB		 Misc
Kulakovskiy et al.(2013)
USF1_HUMAN.H11MO.0.A 		0.914 0.981
Usf1
M08756_2.00 		Mus musculus
NNGTCACGTGVBS
SVBCACGTGACNN		 Misc
Kulakovskiy et al.(2013)
USF1_MOUSE.H11MO.0.A 		0.914 0.981
USF1
M09460_2.00 		Homo sapiens
YCACGTGRBN
NVYCACGTGR		 Misc
Heinz et al.(2010)
GM12878-Usf1_GSE32465 		0.914 0.981
USF1
M09867_2.00 		Homo sapiens
NNRYCACGTGRYNN
NNRYCACGTGRYNN		 Transfac
Matys et al.(2006)
V$USF_01 		0.914 0.981
USF1
M09868_2.00 		Homo sapiens
NNRNCAYRTGNYNN
NNRNCAYRTGNYNN		 Transfac
Matys et al.(2006)
V$USF_02 		0.914 0.981
USF1
M09869_2.00 		Homo sapiens
HCACGTGH
DCACGTGD		 Transfac
Matys et al.(2006)
V$USF_C 		0.914 0.981
USF1
M04147_2.00 		Homo sapiens
VHCAYGTGAYN
NRTCACRTGDB		 SELEX
Yin et al.(2017)
USF1_FL_Methyl-HT-SELEX 		0.914 0.981
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_07548 bHLH 202 257

Links

Other bHLH family TFs
Other Pogona vitticeps TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AATE014785 Anopheles atroparvus AATE014785 I
ACYPI008301 Acyrthosiphon pisum ACYPI008301 N
ADIR005096 Anopheles dirus ADIR005096 I
AEPI009051 Anopheles epiroticus AEPI009051 I
AFAF016726 Anopheles farauti AFAF016726 I
Afo_R007655 Aptenodytes forsteri Afo_R007655 I
AFUN000829 Anopheles funestus AFUN000829 I
Alligator_sinensis_CCG020663.1 Alligator sinensis Alligator_sinensis_CCG020663.1 I
AMEC017008 Anopheles melas AMEC017008 I
AQUA011339 Anopheles quadriannulatus AQUA011339 I
ARNT Anolis carolinensis ENSACAG00000011254 I
ARNT Bos taurus ENSBTAG00000021037 I
ARNT Canis familiaris ENSCAFG00000012149 I
ARNT Choloepus hoffmanni ENSCHOG00000010045 I
arnt Ciona intestinalis ENSCING00000008102 I
ARNT Callithrix jacchus ENSCJAG00000006839 I
ARNT Cavia porcellus ENSCPOG00000014578 I
ARNT Dasypus novemcinctus ENSDNOG00000005093 I
ARNT Equus caballus ENSECAG00000009602 I
ARNT Erinaceus europaeus ENSEEUG00000007500 I
ARNT Echinops telfairi ENSETEG00000001280 I
ARNT Felis catus ENSFCAG00000003644 I
ARNT Homo sapiens ENSG00000143437 D
arnt Gasterosteus aculeatus ENSGACG00000011686 I
ARNT Gallus gallus ENSGALG00000000751 I
ARNT Gorilla gorilla ENSGGOG00000015383 I
ARNT Loxodonta africana ENSLAFG00000011282 I
ARNT Meleagris gallopavo ENSMGAG00000000943 I
ARNT Microcebus murinus ENSMICG00000005872 I
ARNT Myotis lucifugus ENSMLUG00000003502 I
ARNT Macaca mulatta ENSMMUG00000000541 I
ARNT Monodelphis domestica ENSMODG00000018814 I
Arnt Mus musculus ENSMUSG00000015522 D
ARNT Ornithorhynchus anatinus ENSOANG00000004580 I
ARNT Oryctolagus cuniculus ENSOCUG00000013582 I
ARNT Otolemur garnettii ENSOGAG00000004523 I
ARNT Ochotona princeps ENSOPRG00000010374 I
ARNT Oryzias latipes ENSORLG00000010551 I
ARNT Procavia capensis ENSPCAG00000008485 I
ARNT Pan troglodytes ENSPTRG00000001266 I
ARNT Pteropus vampyrus ENSPVAG00000004354 I
Arnt Rattus norvegicus ENSRNOG00000031174 I
ARNT Sus scrofa ENSSSCG00000006646 I
ARNT Taeniopygia guttata ENSTGUG00000004647 I
ARNT Tetraodon nigroviridis ENSTNIG00000008064 I
ARNT Takifugu rubripes ENSTRUG00000014504 I
ARNT Tursiops truncatus ENSTTRG00000007388 I
ARNT Vicugna pacos ENSVPAG00000005439 I
arnt Xenopus tropicalis XB-GENE-855450 I
arnt.L Xenopus laevis XB-GENE-17346408 I
arnt.S Xenopus laevis XB-GENE-866594 I
A_03374 Schistosoma haematobium A_03374 I
BGIBMGA003472 Bombyx mori BGIBMGA003472 I
BGLB009342 Biomphalaria glabrata BGLB009342 I
CLEC002917 Cimex lectularius CLEC002917 I
CLEC012864 Cimex lectularius CLEC012864 I
Cmyd_10007604 Chelonia mydas Cmyd_10007604 I
D915_11353 Fasciola hepatica D915_11353 I
DAPPUDRAFT_309730 Daphnia pulex DAPPUDRAFT_309730 I
ECPE_0000540401 Echinostoma caproni ECPE_0000540401 I
ENSAMEG00000001200 Ailuropoda melanoleuca ENSAMEG00000001200 I
ENSAPLG00000013397 Anas platyrhynchos ENSAPLG00000013397 I
ENSBTAP00000028023-D1 Bos grunniens ENSBTAP00000028023-D1 I
ENSCSAG00000018038 Chlorocebus sabaeus ENSCSAG00000018038 I
ENSDORG00000014121 Dipodomys ordii ENSDORG00000014121 I
ENSGMOG00000006058 Gadus morhua ENSGMOG00000006058 I
ENSMEUG00000003050 Macropus eugenii ENSMEUG00000003050 I
ENSMPUG00000004365 Mustela putorius furo ENSMPUG00000004365 I
ENSNLEG00000009971 Nomascus leucogenys ENSNLEG00000009971 I
ENSOARG00000020870 Ovis aries ENSOARG00000020870 I
ENSONIG00000006431 Oreochromis niloticus ENSONIG00000006431 I
ENSP00000351407 Macaca fascicularis ENSP00000351407 I
ENSPANG00000016773 Papio anubis ENSPANG00000016773 I
ENSPPYG00000000888 Pongo abelii ENSPPYG00000000888 I
ENSPSIG00000008480 Pelodiscus sinensis ENSPSIG00000008480 I
ENSSHAG00000012227 Sarcophilus harrisii ENSSHAG00000012227 I
ENSSTOG00000013876 Ictidomys tridecemlineatus ENSSTOG00000013876 I
ENSTSYG00000006074 Tarsius syrichta ENSTSYG00000006074 I
estExt_fgenesh2_pg.C_1460068 Branchiostoma floridae estExt_fgenesh2_pg.C_1460068 I
GA11313 Drosophila pseudoobscura FBgn0071367 I
GD20825 Drosophila simulans FBgn0192287 I
GE24803 Drosophila yakuba FBgn0241904 I
GF18433 Drosophila ananassae FBgn0095451 I
Gfo_R011690 Geospiza fortis Gfo_R011690 I
GG17399 Drosophila erecta FBgn0109625 I
GH18221 Drosophila grimshawi FBgn0125689 I
GI10175 Drosophila mojavensis FBgn0132941 I
GJ10876 Drosophila virilis FBgn0198144 I
GK11420 Drosophila willistoni FBgn0213431 I
GL12493 Drosophila persimilis FBgn0150099 I
GM26289 Drosophila sechellia FBgn0181143 I
HDID_0000932501 Hymenolepis diminuta HDID_0000932501 N
HHAL008564-PA Halyomorpha halys HHAL008564-PA I
HHAL009348-PA Halyomorpha halys HHAL009348-PA I
HMEL013329 Heliconius melpomene HMEL013329 I
HmN_000109600 Hymenolepis microstoma HmN_000109600 N
ISCW023999 Ixodes scapularis ISCW023999 I
KGM_04621 Danaus plexippus KGM_04621 I
LCUP007387 Lucilia cuprina LCUP007387 I
LDEC004670 Leptinotarsa decemlineata LDEC004670 I
LLOJ003291 Lutzomyia longipalpis LLOJ003291 I
MCINX011636 Melitaea cinxia MCINX011636 I
MDOA015409 Musca domestica MDOA015409 I
Myotis_brandtii_ARNT_10031836 Myotis brandtii Myotis_brandtii_ARNT_10031836 I
NV11924 Nasonia vitripennis NV11924 I
Ocbimv22015061m.g Octopus bimaculoides Ocbimv22015061m.g I
PHUM505970 Pediculus humanus PHUM505970 I
Pvit_04978 Pogona vitticeps Pvit_04978 I
PXEA_0001988401 Protopolystoma xenopodis PXEA_0001988401 I
RPRC004351 Rhodnius prolixus RPRC004351 I
Sakowv30011795m.g Saccoglossus kowalevskii Sakowv30011795m.g I
SINV17691 Solenopsis invicta SINV17691 I
Smp_123420 Schistosoma mansoni Smp_123420 I
SMTD_0000012501 Schistosoma mattheei SMTD_0000012501 I
SMU15010696 Schmidtea mediterranea SMU15010696 I
T265_03519 Opisthorchis viverrini T265_03519 I
Tal_R007034 Tyto alba Tal_R007034 I
TC004710 Tribolium castaneum TC004710 I
tetur01g08330 Tetranychus urticae tetur01g08330 I
tgo Drosophila melanogaster FBgn0264075 D
TRE_0001250901 Trichobilharzia regenti TRE_0001250901 I