Pvit_17633 (Pogona vitticeps)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pvit_17633 T047768_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MLX
M01114_2.00 		Monodelphis domestica
NNNCACGTGN
NCACGTGNNN		 PBM
Lambert et al.(2019)
pTH11463 		0.894 0.982
Mlx
M00752_2.00 		Mus musculus
CACGTGNNN
NNNCACGTG		 PBM
Weirauch et al.(2013)
pTH2882 		0.894 0.964
Mlx
M01721_2.00 		Mus musculus
NCRCGTGNNN
NNNCACGYGN		 PBM
Weirauch et al.(2014)
pTH5070 		0.894 0.964
MLX
M02779_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Jolma et al.(2013)
MLX_1 		0.894 0.964
Mlx
M02815_2.00 		Mus musculus
RTCACGTGAY
RTCACGTGAY		 SELEX
Jolma et al.(2013)
Mlx_1 		0.894 0.964
MLX
M04080_2.00 		Homo sapiens
NCACGTGN
NCACGTGN		 SELEX
Yin et al.(2017)
MLX_eDBD_HT-SELEX 		0.894 0.964
MLX
M04082_2.00 		Homo sapiens
NVCACGTGVYN
NRBCACGTGBN		 SELEX
Yin et al.(2017)
MLX_FL_HT-SELEX 		0.894 0.964
MLX
M04081_2.00 		Homo sapiens
NCACRTGV
BCAYGTGN		 SELEX
Yin et al.(2017)
MLX_eDBD_Methyl-HT-SELEX 		0.894 0.964
MLX
M04083_2.00 		Homo sapiens
NDBCACRTGBV
BVCAYGTGVHN		 SELEX
Yin et al.(2017)
MLX_FL_Methyl-HT-SELEX 		0.894 0.964
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_17633 bHLH 78 136

Links

Other bHLH family TFs
Other Pogona vitticeps TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA037778 Oryza indica BGIOSGA037778 N
BRADI4G02060 Brachypodium distachyon BRADI4G02060 N
F775_31820 Aegilops tauschii F775_31820 N
gene22263-v1.0-hybrid Fragaria vesca gene22263-v1.0-hybrid N
LPERR01G22040 Leersia perrieri LPERR01G22040 N
LPERR12G15510 Leersia perrieri LPERR12G15510 N
Lus10024006.g Linum usitatissimum Lus10024006.g N
Lus10025078.g Linum usitatissimum Lus10025078.g N
MLOC_64240 Hordeum vulgare MLOC_64240 N
OB12G25170 Oryza brachyantha OB12G25170 N
OBART12G18490 Oryza barthii OBART12G18490 N
OGLUM02G04830 Oryza glumaepatula OGLUM02G04830 N
OGLUM12G20140 Oryza glumaepatula OGLUM12G20140 N
OMERI12G13180 Oryza meridionalis OMERI12G13180 N
ONIVA12G17390 Oryza nivara ONIVA12G17390 N
OPUNC12G16690 Oryza punctata OPUNC12G16690 N
ORGLA12G0157500 Oryza glaberrima ORGLA12G0157500 N
ORUFI12G20640 Oryza rufipogon ORUFI12G20640 N
OS12G0610600 Oryza sativa OS12G0610600 N
SELMODRAFT_69130 Selaginella moellendorffii SELMODRAFT_69130 N
SELMODRAFT_69131 Selaginella moellendorffii SELMODRAFT_69131 N
Solyc07g066330.2 Solanum lycopersicum Solyc07g066330.2 N
Traes_5AS_E5FD82E36 Triticum aestivum Traes_5AS_E5FD82E36 N
Traes_5BS_9F043AE17 Triticum aestivum Traes_5BS_9F043AE17 N