CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genewise1.C_sca_2_chr3_3_00831
(
Nectria haematococca
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
estExt_Genewise1.C_sca_2_chr3_3_00831
T048467_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU01871
M01761_2.00
Neurospora crassa
DNNDNNHNNH
DNNDNNHNNH
PBM
Weirauch et al.(2014)
pTH8618
0.889
0.909
sah-2
M01115_2.00
Neurospora crassa
NHYDNNNNHN
NDNNNNHRDN
PBM
Lambert et al.(2019)
pTH9680
0.884
0.982
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1.C_sca_2_chr3_3_00831
bHLH
64
138
KKTAHNMIEKRYRTNLNDKIAALRDSVPSLRIMSKSARGEDTTEDREELHGLTPAHKLNKATVLSKATEYIRHLE
Links
Other
bHLH
family TFs
Other
Nectria haematococca
TFs
136 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_059380
Acremonium chrysogenum
ACRE_059380
N
BBA_02350
Beauveria bassiana
BBA_02350
N
CCM_03446
Cordyceps militaris
CCM_03446
N
CPUR_07239
Claviceps purpurea
CPUR_07239
N
e_gw1.2.1343.1
Nectria haematococca
e_gw1.2.1343.1
N
FFUJ_06166
Fusarium fujikuroi
FFUJ_06166
N
FGRRES_08646
Fusarium graminearum
FGRRES_08646
N
FOXG_03154
Fusarium oxysporum
FOXG_03154
N
FVEG_02020
Fusarium verticillioides
FVEG_02020
N
MAC_00924
Metarhizium acridum
MAC_00924
N
MAJ_03821
Metarhizium majus
MAJ_03821
N
MAM_03208
Metarhizium album
MAM_03208
N
MBR_08316
Metarhizium brunneum
MBR_08316
N
MGU_03487
Metarhizium guizhouense
MGU_03487
N
NechaG36483
Fusarium solani
NechaG36483
N
OCS_00981
Ophiocordyceps sinensis
OCS_00981
N
TRIATDRAFT_293987
Trichoderma atroviride
TRIATDRAFT_293987
N
TRIREDRAFT_106048
Trichoderma reesei
TRIREDRAFT_106048
N
TRIVIDRAFT_212951
Trichoderma virens
TRIVIDRAFT_212951
N
VHEMI06982
Torrubiella hemipterigena
VHEMI06982
N
X797_003612
Metarhizium robertsii
X797_003612
N