fgenesh2_pg.scaffold_201000027 (Branchiostoma floridae)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 fgenesh2_pg.scaffold_201000027 T048574_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tcf21
M01746_2.00 		Mus musculus
RMCAKMTGK
MCAKMTGKY		 PBM
Weirauch et al.(2014)
pTH5087 		0.871 0.904
Tcf21
M02819_2.00 		Mus musculus
VNAACAGCTGTTVN
NBAACAGCTGTTNB		 SELEX
Jolma et al.(2013)
Tcf21_1 		0.871 0.904
TCF21
M04092_2.00 		Homo sapiens
BAACAGCTGBYN
NRVCAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_1 		0.871 0.904
TCF21
M04093_2.00 		Homo sapiens
NRCCATATGKYV
BRMCATATGGYN		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_2 		0.871 0.904
TCF21
M04094_2.00 		Homo sapiens
BAACAGCTGTYV
BRACAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_1 		0.871 0.904
TCF21
M04095_2.00 		Homo sapiens
BACCATATGKYV
BRMCATATGGTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_2 		0.871 0.904
Msc
M01730_2.00 		Mus musculus
NVCRKMYGBN
NVCRKMYGBN		 PBM
Weirauch et al.(2014)
pTH5112 		0.871 0.885
MSC
M02801_2.00 		Homo sapiens
AACAGCTGTT
AACAGCTGTT		 SELEX
Jolma et al.(2013)
MSC_1 		0.871 0.885
MSC
M04183_2.00 		Homo sapiens
NRMCAGMTGBYN
NRVCAKCTGKYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_1 		0.871 0.885
MSC
M04184_2.00 		Homo sapiens
NRVCAYVTGBYN
NRVCABRTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_2 		0.871 0.885
MSC
M04187_2.00 		Homo sapiens
NRMCAGCTGBYV
BRVCAGCTGKYN		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_1 		0.871 0.885
MSC
M04188_2.00 		Homo sapiens
BRMCATATGKYN
NRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_2 		0.871 0.885
MSC
M04185_2.00 		Homo sapiens
NRVCAGCTGBBN
NVVCAGCTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_1 		0.871 0.885
MSC
M04186_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_2 		0.871 0.885
MSC
M04189_2.00 		Homo sapiens
BRACAGCTGTYV
BRACAGCTGTYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_1 		0.871 0.885
MSC
M04190_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_2 		0.871 0.885
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pg.scaffold_201000027 bHLH 72 124

Links

Other bHLH family TFs
Other Branchiostoma floridae TFs

134 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_06603 Capronia coronata A1O1_06603 I
A1O3_05723 Capronia epimyces A1O3_05723 I
A1O5_08857 Cladophialophora psammophila A1O5_08857 I
A1O7_06270 Cladophialophora yegresii A1O7_06270 I
A1O9_10773 Exophiala aquamarina A1O9_10773 I
ACLA_025830 Aspergillus clavatus CADACLAG00002824 I
ACRE_033680 Acremonium chrysogenum ACRE_033680 I
AFUA_1G09670 Aspergillus fumigatus CADAFUAG00007221 I
ANIA_01298 Aspergillus nidulans CADANIAG00001319 D
ARB_00440 Arthroderma benhamiae ARB_00440 I
ATEG_04204 Aspergillus terreus CADATEAG00009987 I
BBA_08083 Beauveria bassiana BBA_08083 I
BDDG_06829 Blastomyces dermatitidis BDDG_06829 I
CADAFLAG00004009 Aspergillus flavus CADAFLAG00004009 I
CADANGAG00006457 Aspergillus niger CADANGAG00006457 I
CADAORAG00006402 Aspergillus oryzae CADAORAG00006402 I
CCM_01116 Cordyceps militaris CCM_01116 I
CGGC5_8357 Colletotrichum gloeosporioides CGGC5_8357 I
CH063_06329 Colletotrichum higginsianum CH063_06329 I
CIMG_10254 Coccidioides immitis CIMG_10254 I
CPC735_013440 Coccidioides posadasii CPC735_013440 I
CPUR_03208 Claviceps purpurea CPUR_03208 I
DOTSEDRAFT_69021 Dothistroma septosporum DOTSEDRAFT_69021 I
EPUS_06221 Endocarpon pusillum EPUS_06221 I
EURHEDRAFT_415231 Aspergillus ruber EURHEDRAFT_415231 I
e_gw1.00083.362.1 Aspergillus carbonarius e_gw1.00083.362.1 I
FFUJ_01501 Fusarium fujikuroi FFUJ_01501 I
fgenesh1_pm.C_chr_1000941 Mycosphaerella graminicola fgenesh1_pm.C_chr_1000941 I
fgenesh1_pm.C_scaffold_1000119 Mycosphaerella fijiensis fgenesh1_pm.C_scaffold_1000119 I
FGRRES_01307 Fusarium graminearum FGRRES_01307 I
FOXG_00080 Fusarium oxysporum FOXG_00080 I
FPSE_01403 Fusarium pseudograminearum FPSE_01403 I
FVEG_01436 Fusarium verticillioides FVEG_01436 I
G647_06262 Cladophialophora carrionii G647_06262 I
GMDG_01119 Pseudogymnoascus destructans GMDG_01119 I
GSTUM_00003292001 Tuber melanosporum GSTUM_00003292001 I
H102_01702 Trichophyton rubrum H102_01702 I
H105_01718 Trichophyton soudanense H105_01718 I
HCBG_03326 Histoplasma capsulatum HCBG_03326 I
HMPREF1120_04164 Exophiala dermatitidis HMPREF1120_04164 I
LEMA_P050050.1 Leptosphaeria maculans LEMA_P050050.1 I
MAM_03651 Metarhizium album MAM_03651 I
MCYG_06262 Microsporum canis MCYG_06262 I
MGG_05709 Magnaporthe oryzae MGG_05709 I
MPH_03547 Macrophomina phaseolina MPH_03547 I
MYCFIDRAFT_148203 Pseudocercospora fijiensis MYCFIDRAFT_148203 I
Mycgr3G84231 Zymoseptoria tritici Mycgr3G84231 I
NFIA_015940 Neosartorya fischeri CADNFIAG00000638 I
OCS_06442 Ophiocordyceps sinensis OCS_06442 I
PAAG_02798 Paracoccidioides sp lutzii PAAG_02798 I
PABG_03267 Paracoccidioides brasiliensis PABG_03267 I
Pc16g06560 Penicillium chrysogenum Pc16g06560 I
PCH_Pc16g06560 Penicillium rubens PCH_Pc16g06560 I
PDE_07053 Penicillium oxalicum PDE_07053 I
PDIP_40460 Penicillium digitatum PDIP_40460 I
PEX1_052970 Penicillium expansum PEX1_052970 I
PITC_023420 Penicillium italicum PITC_023420 I
PMAA_025110 Penicillium marneffei PMAA_025110 I
PMAA_025110 Talaromyces marneffei PMAA_025110 I
PV04_06676 Capronia semiimmersa PV04_06676 I
PV05_08012 Exophiala xenobiotica PV05_08012 I
PV06_10058 Exophiala oligosperma PV06_10058 I
PV07_03563 Cladophialophora immunda PV07_03563 I
PV08_08114 Exophiala spinifera PV08_08114 I
PV11_07531 Exophiala sideris PV11_07531 I
PVAR5_5311 Byssochlamys spectabilis PVAR5_5311 I
SEPMUDRAFT_146214 Sphaerulina musiva SEPMUDRAFT_146214 I
SNOG_15057 Stagonospora nodorum SNOG_15057 I
SNOG_15057 Phaeosphaeria nodorum SNOG_15057 I
TESG_07003 Trichophyton tonsurans TESG_07003 I
THITE_2113068 Thielavia terrestris THITE_2113068 I
TRIATDRAFT_148632 Trichoderma atroviride TRIATDRAFT_148632 I
TRIREDRAFT_58130 Trichoderma reesei TRIREDRAFT_58130 I
TRIVIDRAFT_173998 Trichoderma virens TRIVIDRAFT_173998 I
TRV_02680 Trichophyton verrucosum TRV_02680 I
TSTA_073940 Talaromyces stipitatus TSTA_073940 I
U727_0043047031 Penicillium solitum U727_0043047031 I
UCREL1_1818 Eutypa lata UCREL1_1818 I
UCRNP2_6160 Neofusicoccum parvum UCRNP2_6160 I
UREG_03477 Uncinocarpus reesii UREG_03477 I
V499_08351 Pseudogymnoascus pannorum V499_08351 I
VHEMI02386 Torrubiella hemipterigena VHEMI02386 I
W97_00703 Coniosporium apollinis W97_00703 I
Z517_01133 Fonsecaea pedrosoi Z517_01133 I
Z518_05851 Rhinocladiella mackenziei Z518_05851 I
Z519_03796 Cladophialophora bantiana Z519_03796 I