Sakowv30011934m.g (Saccoglossus kowalevskii)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Sakowv30011934m.g T048908_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NEUROD1
M04148_2.00 		Homo sapiens
RMCATATGKYVNNNTAWTT
AAWTANNNBRMCATATGKY		 SELEX
Yin et al.(2017)
NEUROD1_FL_HT-SELEX 		0.894 0.923
NEUROD1
M08057_2.00 		Homo sapiens
NNVCAGATGGNNN
NNNCCATCTGBNN		 ChIP-seq
Mathelier et al.(2014)
MA1109.1 		0.894 0.923
NEUROD1
M08735_2.00 		Homo sapiens
RVCAGATGGY
RCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF1_HUMAN.H11MO.0.A 		0.894 0.923
Neurod1
M08764_2.00 		Mus musculus
RVCAGATGGY
RCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF1_MOUSE.H11MO.0.A 		0.894 0.923
Neurod1
M09474_2.00 		Mus musculus
RVCAGATGGY
RCCATCTGBY		 Misc
Heinz et al.(2010)
Islet-NeuroD1_GSE30298 		0.894 0.923
NEUROD1
M09873_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NEUROD_01 		0.894 0.923
NEUROD1
M09874_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NEUROD_02 		0.894 0.923
NEUROD1
M04149_2.00 		Homo sapiens
RVCATATGBYVYNBTAWTW
WAWTAVNRBRVCATATGBY		 SELEX
Yin et al.(2017)
NEUROD1_FL_Methyl-HT-SELEX 		0.894 0.923
NEUROD2
M02795_2.00 		Homo sapiens
RVCATATGKY
RMCATATGBY		 SELEX
Jolma et al.(2013)
NEUROD2_1 		0.859 0.904
NEUROD2
M04160_2.00 		Homo sapiens
RVCATATGKY
RMCATATGBY		 SELEX
Yin et al.(2017)
NEUROD2_FL_HT-SELEX 		0.859 0.904
NEUROD2
M08737_2.00 		Homo sapiens
RRCAGMTGG
CCAKCTGYY		 Misc
Kulakovskiy et al.(2013)
NDF2_HUMAN.H11MO.0.B 		0.859 0.904
Neurod2
M08770_2.00 		Mus musculus
RVCAGATGGB
VCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF2_MOUSE.H11MO.0.A 		0.859 0.904
NEUROD2
M04161_2.00 		Homo sapiens
RMCATATGBY
RVCATATGKY		 SELEX
Yin et al.(2017)
NEUROD2_FL_Methyl-HT-SELEX 		0.859 0.904
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23937281_peptide bHLH 96 148
23937282_peptide bHLH 96 148

Links

Other bHLH family TFs
Other Saccoglossus kowalevskii TFs

270 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AOL_s00215g441 Arthrobotrys oligospora AOL_s00215g441 I 0.000
AUEXF2481DRAFT_2214 Aureobasidium subglaciale AUEXF2481DRAFT_2214 I 0.000
BAUCODRAFT_31811 Baudoinia compniacensis BAUCODRAFT_31811 I 0.000
BDDG_07330 Blastomyces dermatitidis BDDG_07330 I 0.000
CIMG_09809 Coccidioides immitis CIMG_09809 I 0.000
CPC735_022740 Coccidioides posadasii CPC735_022740 I 0.000
DOTSEDRAFT_41728 Dothistroma septosporum DOTSEDRAFT_41728 I 0.000
estExt_fgenesh1_pg.C_chr_100274 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_100274 I 0.000
estExt_Genewise1.C_160684 Mycosphaerella fijiensis estExt_Genewise1.C_160684 I 0.000
GMDG_01671 Pseudogymnoascus destructans GMDG_01671 I 0.000
H072_3292 Dactylellina haptotyla H072_3292 I 0.000
H102_00402 Trichophyton rubrum H102_00402 N 0.000
H105_00399 Trichophyton soudanense H105_00399 N 0.000
HCBG_06235 Histoplasma capsulatum HCBG_06235 I 0.000
M437DRAFT_57951 Aureobasidium melanogenum M437DRAFT_57951 I 0.000
M438DRAFT_333229 Aureobasidium pullulans M438DRAFT_333229 I 0.000
MCYG_02854 Microsporum canis MCYG_02854 N 0.000
MGYG_00028 Microsporum gypseum MGYG_00028 N 0.000
MYCFIDRAFT_52991 Pseudocercospora fijiensis MYCFIDRAFT_52991 I 0.000
Mycgr3G111074 Zymoseptoria tritici Mycgr3G111074 I 0.000
PAAG_05257 Paracoccidioides sp lutzii PAAG_05257 N 0.000
PABG_07603 Paracoccidioides brasiliensis PABG_07603 I 0.000
SEPMUDRAFT_147002 Sphaerulina musiva SEPMUDRAFT_147002 I 0.000
TEQG_08843 Trichophyton equinum TEQG_08843 N 0.000
TESG_03067 Trichophyton tonsurans TESG_03067 N 0.000
V499_02322 Pseudogymnoascus pannorum V499_02322 I 0.000