CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10023707m.g
(
Capsella rubella
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Carubv10023707m.g
T049437_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10023707m
bHLH
116
164
SRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELK
Links
Other
bHLH
family TFs
Other
Capsella rubella
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BHLH51
Arabidopsis thaliana
AT2G40200
N
0.914
Bo3g034790
Brassica oleracea
Bo3g034790
N
0.863
Bo4g188890
Brassica oleracea
Bo4g188890
N
0.914
Bostr.23794s0037
Boechera stricta
Bostr.23794s0037
N
0.914
Bra000177
Brassica rapa
Bra000177
I
0.863
Bra017024
Brassica rapa
Bra017024
N
0.914
Cagra.7053s0004
Capsella grandiflora
Cagra.7053s0004
N
0.914
fgenesh2_kg.108__1__AT2G40200.1
Arabidopsis lyrata
fgenesh2_kg.108__1__AT2G40200.1
I
0.893
fgenesh2_kg.4__2126__AT2G40200.1
Arabidopsis lyrata
fgenesh2_kg.4__2126__AT2G40200.1
N
0.869
Gorai.011G292100
Gossypium raimondii
Gorai.011G292100
I
0.844
Thhalv10017126m.g
Eutrema salsugineum
Thhalv10017126m.g
N
0.884