evm.TU.supercontig_7.53 (Carica papaya)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 evm.TU.supercontig_7.53 T049798_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK20225.1
M01128_2.00 		Cannabis sativa
NCACGTGVN
NBCACGTGN		 PBM
Lambert et al.(2019)
pTH11274 		0.914 0.857
PK07858.1
M01123_2.00 		Cannabis sativa
HCACGTGB
VCACGTGD		 PBM
Lambert et al.(2019)
pTH11370 		0.852 0.776
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_7.53 bHLH 73 121

Links

Other bHLH family TFs
Other Carica papaya TFs

109 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29900.m001610 Ricinus communis 29900.m001610 I 0.860
AMTR_s00007p00170710 Amborella trichopoda AMTR_s00007p00170710 I
Aquca_081_00012 Aquilegia coerulea Aquca_081_00012 I
BGIOSGA003013 Oryza indica BGIOSGA003013 I 0.846
Bostr.20505s0075 Boechera stricta Bostr.20505s0075 N
BRADI1G67500 Brachypodium distachyon BRADI1G67500 I 0.842
BRADI2G07050 Brachypodium distachyon BRADI2G07050 N
cassava18812.valid.m1 Manihot esculenta cassava18812.valid.m1 I 0.882
cassava32077.m1 Manihot esculenta cassava32077.m1 I 0.884
Ciclev10016289m.g Citrus clementina Ciclev10016289m.g I 0.884
Cla019977 Citrullus lanatus Cla019977 I 0.840
Cucsa.213230 Cucumis sativus Cucsa.213230 I 0.840
Eucgr.E02743 Eucalyptus grandis Eucgr.E02743 I 0.852
Eucgr.K01103 Eucalyptus grandis Eucgr.K01103 N
gene29828-v1.0-hybrid Fragaria vesca gene29828-v1.0-hybrid I 0.858
GLYMA07G32690 Glycine max GLYMA07G32690 I 0.914
Gorai.009G163400 Gossypium raimondii Gorai.009G163400 I 0.882
Gorai.011G034000 Gossypium raimondii Gorai.011G034000 I 0.870
GRMZM2G016039 Zea mays GRMZM2G016039 I 0.858
GRMZM2G043854 Zea mays GRMZM2G043854 I 0.842
GSMUA_Achr10G14370_001 Musa acuminata GSMUA_Achr10G14370_001 N
GSMUA_Achr1G21280_001 Musa acuminata GSMUA_Achr1G21280_001 I 0.873
GSMUA_Achr2G20040_001 Musa acuminata GSMUA_Achr2G20040_001 N
GSMUA_Achr3G03510_001 Musa acuminata GSMUA_Achr3G03510_001 N
GSMUA_Achr7G10740_001 Musa acuminata GSMUA_Achr7G10740_001 I 0.855
LPERR01G07000 Leersia perrieri LPERR01G07000 I 0.876
LPERR03G10060 Leersia perrieri LPERR03G10060 I 0.842
Lus10001885.g Linum usitatissimum Lus10001885.g I 0.884
Lus10013917.g Linum usitatissimum Lus10013917.g I 0.882
MDP0000249969 Malus domestica MDP0000249969 I 0.863
MDP0000256492 Malus domestica MDP0000256492 N
mgf022146m Mimulus guttatus mgf022146m N
MLOC_64390 Hordeum vulgare MLOC_64390 I 0.858
OB01G17480 Oryza brachyantha OB01G17480 I 0.846
OB03G21490 Oryza brachyantha OB03G21490 I 0.842
OBART03G11320 Oryza barthii OBART03G11320 I 0.842
OGLUM01G08450 Oryza glumaepatula OGLUM01G08450 I 0.846
OGLUM03G11280 Oryza glumaepatula OGLUM03G11280 I 0.842
OLONG_004075 Oryza longistaminata OLONG_004075 I 0.842
OMERI01G07330 Oryza meridionalis OMERI01G07330 I 0.846
ONIVA01G09540 Oryza nivara ONIVA01G09540 I 0.846
ONIVA03G12280 Oryza nivara ONIVA03G12280 I 0.842
OPUNC01G07130 Oryza punctata OPUNC01G07130 I 0.846
orange1.1g024670m.g Citrus sinensis orange1.1g024670m.g I 0.884
ORGLA01G0065100 Oryza glaberrima ORGLA01G0065100 I 0.846
ORGLA03G0109100 Oryza glaberrima ORGLA03G0109100 I 0.842
ORUFI01G08040 Oryza rufipogon ORUFI01G08040 I 0.846
ORUFI03G11650 Oryza rufipogon ORUFI03G11650 I 0.842
OS01G0218100 Oryza sativa OS01G0218100 I 0.846
OS03G0260600 Oryza sativa OS03G0260600 I 0.842
Pavir.Ea00157 Panicum virgatum Pavir.Ea00157 I 0.858
Pavir.Eb00095 Panicum virgatum Pavir.Eb00095 I 0.858
Pavir.Ib01099 Panicum virgatum Pavir.Ib01099 I 0.842
PGSC0003DMG400010208 Solanum tuberosum PGSC0003DMG400010208 I 0.852
PK20225.1 Cannabis sativa PK20225.1 D 0.914
PRUPE_ppa021837mg Prunus persica PRUPE_ppa021837mg N
SapurV1A.0029s0640 Salix purpurea SapurV1A.0029s0640 N
SapurV1A.1185s0010 Salix purpurea SapurV1A.1185s0010 I 0.842
SapurV1A.1821s0030 Salix purpurea SapurV1A.1821s0030 I 0.842
Sb01g040450 Sorghum bicolor Sb01g040450 I 0.842
Sb03g001730 Sorghum bicolor Sb03g001730 I 0.858
Si002517m.g Setaria italica Si002517m.g I 0.845
Si039730m.g Setaria italica Si039730m.g I 0.842
Solyc02g076920.2 Solanum lycopersicum Solyc02g076920.2 I 0.852
TCM_029711 Theobroma cacao TCM_029711 I 0.882
TRAES3BF011300020CFD_g Triticum aestivum TRAES3BF011300020CFD_g I 0.858
VIT_14s0068g01580 Vitis vinifera VIT_14s0068g01580 I 0.884