Gorai.007G034400 (Gossypium raimondii)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Gorai.007G034400 T049999_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BPE
M01700_2.00 		Arabidopsis thaliana
NCACGTNNN
NNNACGTGN		 PBM
Weirauch et al.(2014)
pTH7290 		0.879 0.980
BPE
M06726_2.00 		Arabidopsis thaliana
NNNNNNNNCACGTGNNNNNWB
VWNNNNNCACGTGNNNNNNNN		 Dap-seq
OMalley et al.(2016)
bHLH31_col 		0.879 0.980
BHLH78
M01713_2.00 		Arabidopsis thaliana
GCACGTGC
GCACGTGC		 PBM
Weirauch et al.(2014)
pTH7666 		0.866 0.863
BHLH49
M01052_2.00 		Arabidopsis thaliana
NNCACGTGCN
NGCACGTGNN		 PBM
Sullivan et al.(2014)
pTH7309 		0.840 0.843
PK06517.1
M01122_2.00 		Cannabis sativa
NCACGTGC
GCACGTGN		 PBM
Lambert et al.(2019)
pTH10104 		0.840 0.843
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.007G034400.1 bHLH 163 213
Gorai.007G034400.2 bHLH 163 213
Gorai.007G034400.3 bHLH 163 195

Links

Other bHLH family TFs
Other Gossypium raimondii TFs

564 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_121547 Agaricus bisporus AGABI2DRAFT_121547 N
BN946_scf184788.g15 Trametes cinnabarina BN946_scf184788.g15 N
BOTBODRAFT_30261 Botryobasidium botryosum BOTBODRAFT_30261 N
CC1G_02158 Coprinopsis cinerea CC1G_02158 N
CERSUDRAFT_116659 Ceriporiopsis subvermispora CERSUDRAFT_116659 N
CY34DRAFT_809540 Suillus luteus CY34DRAFT_809540 N
DICSQDRAFT_138828 Dichomitus squalens DICSQDRAFT_138828 N
fgenesh2_pm.C_scaffold_5000214 Heterobasidion annosum fgenesh2_pm.C_scaffold_5000214 N
FIBRA_04369 Fibroporia radiculosa FIBRA_04369 N
FOMPIDRAFT_76327 Fomitopsis pinicola FOMPIDRAFT_76327 N
GALMADRAFT_1295974 Galerina marginata GALMADRAFT_1295974 N
GLOTRDRAFT_27195 Gloeophyllum trabeum GLOTRDRAFT_27195 N
HETIRDRAFT_445496 Heterobasidion irregulare HETIRDRAFT_445496 N
HYDPIDRAFT_28799 Hydnomerulius pinastri HYDPIDRAFT_28799 N
JAAARDRAFT_186063 Jaapia argillacea JAAARDRAFT_186063 N
K443DRAFT_684920 Laccaria amethystina K443DRAFT_684920 N
LACBIDRAFT_307744 Laccaria bicolor LACBIDRAFT_307744 N
M378DRAFT_595224 Amanita muscaria M378DRAFT_595224 N
M404DRAFT_31022 Pisolithus tinctorius M404DRAFT_31022 N
M413DRAFT_256733 Hebeloma cylindrosporum M413DRAFT_256733 N
Moror_2623 Moniliophthora roreri Moror_2623 N
PHACADRAFT_260934 Phanerochaete carnosa PHACADRAFT_260934 N
PHLGIDRAFT_35738 Phlebiopsis gigantea PHLGIDRAFT_35738 N
PIIN_05229 Piriformospora indica PIIN_05229 N
PILCRDRAFT_812601 Piloderma croceum PILCRDRAFT_812601 N
PISMIDRAFT_251346 Pisolithus microcarpus PISMIDRAFT_251346 N
PLICRDRAFT_118381 Plicaturopsis crispa PLICRDRAFT_118381 N
SCHCODRAFT_112581 Schizophyllum commune SCHCODRAFT_112581 N
SCLCIDRAFT_91585 Scleroderma citrinum SCLCIDRAFT_91585 N
SERLA73DRAFT_172732 Serpula lacrymans SERLA73DRAFT_172732 N
V565_097840 Rhizoctonia solani V565_097840 N