CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10041908.g
(
Linum usitatissimum
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Lus10041908.g
T050298_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK18401.1
M01126_2.00
Cannabis sativa
NNNVCACGTGBN
NVCACGTGBNNN
PBM
Lambert et al.(2019)
pTH11272
0.911
0.843
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10041908
bHLH
29
79
RKVQKADRERLRRDRLNEQFLELGHTLDPERPKNDKATILTDTIQILKDLT
Links
Other
bHLH
family TFs
Other
Linum usitatissimum
TFs
65 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACLA_017260
Aspergillus clavatus
CADACLAG00001517
N
CCM_08648
Cordyceps militaris
CCM_08648
N
HCBG_03491
Histoplasma capsulatum
HCBG_03491
N
HCBG_03541
Histoplasma capsulatum
HCBG_03541
N
VDBG_04521
Verticillium albo atrum
VDBG_04521
N
VDBG_04521
Verticillium alfalfae
VDBG_04521
N