MDP0000231650 (Malus domestica)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 MDP0000231650 T050386_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLH74
M06720_2.00 		Arabidopsis thaliana
SDHSDNDNNCACGTGVNNNNW
WNNNNBCACGTGNNHNHSDHS		 Dap-seq
OMalley et al.(2016)
bHLH74_col_a 		0.914 0.980
BHLH74
M06721_2.00 		Arabidopsis thaliana
CACGTGAY
RTCACGTG		 Dap-seq
OMalley et al.(2016)
bHLH74_colamp_a 		0.914 0.980
gw1.270.82.1
M01758_2.00 		Physcomitrella patens
NCACGTGH
DCACGTGN		 PBM
Weirauch et al.(2014)
pTH8457 		0.914 0.902
BHLH77
M06736_2.00 		Arabidopsis thaliana
NKCACGTGVHNWHNB
VNDWNDBCACGTGMN		 Dap-seq
OMalley et al.(2016)
bHLH77_col_a 		0.914 0.882
BHLH49
M01052_2.00 		Arabidopsis thaliana
NNCACGTGCN
NGCACGTGNN		 PBM
Sullivan et al.(2014)
pTH7309 		0.902 0.922
PK06517.1
M01122_2.00 		Cannabis sativa
NCACGTGC
GCACGTGN		 PBM
Lambert et al.(2019)
pTH10104 		0.902 0.882
BHLH78
M01713_2.00 		Arabidopsis thaliana
GCACGTGC
GCACGTGC		 PBM
Weirauch et al.(2014)
pTH7666 		0.875 0.863
BPE
M01700_2.00 		Arabidopsis thaliana
NCACGTNNN
NNNACGTGN		 PBM
Weirauch et al.(2014)
pTH7290 		0.862 0.804
BPE
M06726_2.00 		Arabidopsis thaliana
NNNNNNNNCACGTGNNNNNWB
VWNNNNNCACGTGNNNNNNNN		 Dap-seq
OMalley et al.(2016)
bHLH31_col 		0.862 0.804
PK05923.1
M01121_2.00 		Cannabis sativa
NNNNNNN
NNNNNNN		 PBM
Lambert et al.(2019)
pTH11368 		0.855 0.765
BEE2
M01708_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8094 		0.852 0.765
AT2G18300
M01702_2.00 		Arabidopsis thaliana
NBCACGTGCNNN
NNNGCACGTGVN		 PBM
Weirauch et al.(2014)
pTH7289 		0.852 0.745
AT2G18300
M06729_2.00 		Arabidopsis thaliana
ACTGGT
ACCAGT		 Dap-seq
OMalley et al.(2016)
bHLH64_col_a 		0.852 0.745
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000231650 bHLH 270 320

Links

Other bHLH family TFs
Other Malus domestica TFs

905 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_192530 Agaricus bisporus AGABI2DRAFT_192530 N 0.000
BN946_scf184994.g55 Trametes cinnabarina BN946_scf184994.g55 I 0.000
BN946_scf184994.g60 Trametes cinnabarina BN946_scf184994.g60 N 0.000
BOTBODRAFT_99971 Botryobasidium botryosum BOTBODRAFT_99971 N 0.000
DICSQDRAFT_181897 Dichomitus squalens DICSQDRAFT_181897 N 0.000
FIBRA_02642 Fibroporia radiculosa FIBRA_02642 I 0.000
FOMPIDRAFT_1081834 Fomitopsis pinicola FOMPIDRAFT_1081834 I 0.000
GALMADRAFT_227034 Galerina marginata GALMADRAFT_227034 N 0.000
Genemark.3077_g Heterobasidion annosum Genemark.3077_g N 0.000
GLOTRDRAFT_38143 Gloeophyllum trabeum GLOTRDRAFT_38143 I 0.000
gw1.11.239.1 Sporobolomyces roseus gw1.11.239.1 N 0.000
HETIRDRAFT_476671 Heterobasidion irregulare HETIRDRAFT_476671 N 0.000
JAAARDRAFT_93592 Jaapia argillacea JAAARDRAFT_93592 I 0.000
K443DRAFT_1017 Laccaria amethystina K443DRAFT_1017 N 0.000
LACBIDRAFT_386478 Laccaria bicolor LACBIDRAFT_386478 N 0.000
M404DRAFT_551810 Pisolithus tinctorius M404DRAFT_551810 N 0.000
M408DRAFT_20648 Serendipita vermifera M408DRAFT_20648 N 0.000
M422DRAFT_111122 Sphaerobolus stellatus M422DRAFT_111122 I 0.000
M422DRAFT_114792 Sphaerobolus stellatus M422DRAFT_114792 N 0.000
M422DRAFT_146751 Sphaerobolus stellatus M422DRAFT_146751 N 0.000
M422DRAFT_91926 Sphaerobolus stellatus M422DRAFT_91926 I 0.000
MVLG_00343 Microbotryum violaceum MVLG_00343 N 0.000
MVLG_04343 Microbotryum violaceum MVLG_04343 N 0.000
PaG_05617 Pseudozyma aphidis PaG_05617 N 0.000
PAN0_018c5621 Pseudozyma antarctica PAN0_018c5621 N 0.000
PIIN_01319 Piriformospora indica PIIN_01319 N 0.000
POSPLDRAFT_104707 Postia placenta POSPLDRAFT_104707 I 0.000
POSPLDRAFT_43059 Postia placenta POSPLDRAFT_43059 I 0.000
PSEUBRA_SCAF20g03099 Pseudozyma brasiliensis PSEUBRA_SCAF20g03099 N 0.000
RHTO_05563 Rhodosporidium toruloides RHTO_05563 N 0.000
RTG_00382 Rhodotorula glutinis RTG_00382 N 0.000
sr16650 Sporisorium reilianum sr16650 N 0.000
UHOR_08562 Ustilago hordei UHOR_08562 N 0.000
UM06025 Ustilago maydis UM06025 N 0.000
V565_059860 Rhizoctonia solani V565_059860 N 0.000
V565_096080 Rhizoctonia solani V565_096080 N 0.000