orange1.1g015337m.g (Citrus sinensis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 orange1.1g015337m.g T050552_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLH122
M06724_2.00 		Arabidopsis thaliana
NNDNCMACTTGNNH
DNNCAAGTKGNHNN		 Dap-seq
OMalley et al.(2016)
bHLH122_col100_a 		0.914 0.902
BHLH122
M06725_2.00 		Arabidopsis thaliana
DNCMACTTGYN
NRCAAGTKGNH		 Dap-seq
OMalley et al.(2016)
bHLH122_colamp_a 		0.914 0.902
OS08G0506700
M01755_2.00 		Oryza sativa
NCCACTTGN
NCAAGTGGN		 PBM
Weirauch et al.(2014)
pTH8547 		0.867 0.922
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g015337m bHLH 337 387
orange1.1g015380m bHLH 337 387

Links

Other bHLH family TFs
Other Citrus sinensis TFs

160 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CTHT_0038660 Chaetomium thermophilum CTHT_0038660 N
estExt_Genewise1Plus.C_120364 Neurospora discreta estExt_Genewise1Plus.C_120364 N
fsd-1 Neurospora crassa NCU09915 N
GLRG_06073 Colletotrichum graminicola GLRG_06073 N
MYCTH_37566 Myceliophthora thermophila MYCTH_37566 N
NEUTE1DRAFT_80293 Neurospora tetrasperma NEUTE1DRAFT_80293 N
PODANS_1_22920 Podospora anserina PODANS_1_22920 N
THITE_2055949 Thielavia terrestris THITE_2055949 N
VDAG_00592 Verticillium dahliae VDAG_00592 N