orange1.1g017964m.g (Citrus sinensis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 orange1.1g017964m.g T050555_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BEE2
M01708_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8094 		0.889 0.745
AT2G18300
M01702_2.00 		Arabidopsis thaliana
NBCACGTGCNNN
NNNGCACGTGVN		 PBM
Weirauch et al.(2014)
pTH7289 		0.889 0.706
AT2G18300
M06729_2.00 		Arabidopsis thaliana
ACTGGT
ACCAGT		 Dap-seq
OMalley et al.(2016)
bHLH64_col_a 		0.889 0.706
BHLH78
M01713_2.00 		Arabidopsis thaliana
GCACGTGC
GCACGTGC		 PBM
Weirauch et al.(2014)
pTH7666 		0.839 0.745
gw1.270.82.1
M01758_2.00 		Physcomitrella patens
NCACGTGH
DCACGTGN		 PBM
Weirauch et al.(2014)
pTH8457 		0.839 0.745
BHLH49
M01052_2.00 		Arabidopsis thaliana
NNCACGTGCN
NGCACGTGNN		 PBM
Sullivan et al.(2014)
pTH7309 		0.839 0.725
PK06517.1
M01122_2.00 		Cannabis sativa
NCACGTGC
GCACGTGN		 PBM
Lambert et al.(2019)
pTH10104 		0.839 0.725
BHLH74
M06720_2.00 		Arabidopsis thaliana
SDHSDNDNNCACGTGVNNNNW
WNNNNBCACGTGNNHNHSDHS		 Dap-seq
OMalley et al.(2016)
bHLH74_col_a 		0.839 0.725
BHLH74
M06721_2.00 		Arabidopsis thaliana
CACGTGAY
RTCACGTG		 Dap-seq
OMalley et al.(2016)
bHLH74_colamp_a 		0.839 0.725
BHLH77
M06736_2.00 		Arabidopsis thaliana
NKCACGTGVHNWHNB
VNDWNDBCACGTGMN		 Dap-seq
OMalley et al.(2016)
bHLH77_col_a 		0.839 0.706
BPE
M01700_2.00 		Arabidopsis thaliana
NCACGTNNN
NNNACGTGN		 PBM
Weirauch et al.(2014)
pTH7290 		0.839 0.686
PK05923.1
M01121_2.00 		Cannabis sativa
NNNNNNN
NNNNNNN		 PBM
Lambert et al.(2019)
pTH11368 		0.839 0.686
BPE
M06726_2.00 		Arabidopsis thaliana
NNNNNNNNCACGTGNNNNNWB
VWNNNNNCACGTGNNNNNNNN		 Dap-seq
OMalley et al.(2016)
bHLH31_col 		0.839 0.686
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g017964m bHLH 162 212
orange1.1g024111m bHLH 162 212

Links

Other bHLH family TFs
Other Citrus sinensis TFs

718 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_070330 Acremonium chrysogenum ACRE_070330 N
BBA_00677 Beauveria bassiana BBA_00677 N
CCM_01168 Cordyceps militaris CCM_01168 N
CFIO01_01718 Colletotrichum fioriniae CFIO01_01718 N
CGGC5_9846 Colletotrichum gloeosporioides CGGC5_9846 N
CH063_14085 Colletotrichum higginsianum CH063_14085 N
CHGG_00255 Chaetomium globosum CHGG_00255 N
Cob_00031 Colletotrichum orbiculare Cob_00031 N
CPUR_05471 Claviceps purpurea CPUR_05471 N
CSUB01_08217 Colletotrichum sublineola CSUB01_08217 N
CTHT_0049560 Chaetomium thermophilum CTHT_0049560 N
estExt_Genewise1Plus.C_90327 Neurospora discreta estExt_Genewise1Plus.C_90327 N
FFUJ_13711 Fusarium fujikuroi FFUJ_13711 N
FGRRES_07924 Fusarium graminearum FGRRES_07924 N
FOXG_03748 Fusarium oxysporum FOXG_03748 N
FPSE_04461 Fusarium pseudograminearum FPSE_04461 N
FVEG_12115 Fusarium verticillioides FVEG_12115 N
GLRG_01759 Colletotrichum graminicola GLRG_01759 N
MAC_09219 Metarhizium acridum MAC_09219 N
MAJ_09874 Metarhizium majus MAJ_09874 N
MAM_04529 Metarhizium album MAM_04529 N
MANI_021779 Metarhizium anisopliae MANI_021779 N
MBR_08936 Metarhizium brunneum MBR_08936 N
MGU_09069 Metarhizium guizhouense MGU_09069 N
MYCTH_2066181 Myceliophthora thermophila MYCTH_2066181 N
NCU10080 Neurospora crassa NCU10080 N
NechaG97941 Fusarium solani NechaG97941 N
NEUTE1DRAFT_67858 Neurospora tetrasperma NEUTE1DRAFT_67858 N
OCS_06070 Ophiocordyceps sinensis OCS_06070 N
PODANS_5_10990 Podospora anserina PODANS_5_10990 N
S40285_07036 Stachybotrys chlorohalonata S40285_07036 N
S40288_08767 Stachybotrys chartarum S40288_08767 N
SMAC_03574 Sordaria macrospora SMAC_03574 N
TRIATDRAFT_42001 Trichoderma atroviride TRIATDRAFT_42001 N
TRIREDRAFT_62432 Trichoderma reesei TRIREDRAFT_62432 N
TRIVIDRAFT_198099 Trichoderma virens TRIVIDRAFT_198099 N
UV8b_5500 Ustilaginoidea virens UV8b_5500 N
VHEMI02938 Torrubiella hemipterigena VHEMI02938 N
X797_009365 Metarhizium robertsii X797_009365 N