Pavir.Ab02693 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.Ab02693 T050664_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ab02693.1.p bHLH 38 87
Pavir.Ab02693.2.p bHLH 1 42

Links

Other bHLH family TFs
Other Panicum virgatum TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Al_scaffold_0007_76 Arabidopsis lyrata Al_scaffold_0007_76 I
Aquca_006_00159 Aquilegia coerulea Aquca_006_00159 I
AT4G38900 Arabidopsis thaliana AT4G38900 I
BGIOSGA029105 Oryza indica BGIOSGA029105 I
BGIOSGA029106 Oryza indica BGIOSGA029106 I
Bo3g149620 Brassica oleracea Bo3g149620 I
Bo7g119550 Brassica oleracea Bo7g119550 I
Bostr.25542s0069 Boechera stricta Bostr.25542s0069 I
Bra010722 Brassica rapa Bra010722 I
Bra033582 Brassica rapa Bra033582 I
BRADI1G76690 Brachypodium distachyon BRADI1G76690 N
BRADI3G41980 Brachypodium distachyon BRADI3G41980 I
BRADI5G14497 Brachypodium distachyon BRADI5G14497 I
Cagra.1383s0070 Capsella grandiflora Cagra.1383s0070 N
Carubv10004500m.g Capsella rubella Carubv10004500m.g N
cassava30160.valid.m1 Manihot esculenta cassava30160.valid.m1 I
cassava38273.valid.m1 Manihot esculenta cassava38273.valid.m1 I
Ca_27693 Cicer arietinum Ca_27693 I
Ciclev10028062m.g Citrus clementina Ciclev10028062m.g I
Cla016124 Citrullus lanatus Cla016124 I
Cla016125 Citrullus lanatus Cla016125 I
Cucsa.382180 Cucumis sativus Cucsa.382180 I
Cucsa.382190 Cucumis sativus Cucsa.382190 I
estExt_gwp_gw1.C_200078 Physcomitrella patens estExt_gwp_gw1.C_200078 I
estExt_gwp_gw1.C_5120003 Physcomitrella patens estExt_gwp_gw1.C_5120003 I
Eucgr.I01335 Eucalyptus grandis Eucgr.I01335 I
evm.TU.supercontig_150.7 Carica papaya evm.TU.supercontig_150.7 I
e_gw1.20.99.1 Physcomitrella patens e_gw1.20.99.1 I
F775_32059 Aegilops tauschii F775_32059 I
gene01680-v1.0-hybrid Fragaria vesca gene01680-v1.0-hybrid I
GLYMA04G02850 Glycine max GLYMA04G02850 I
GLYMA11G11791 Glycine max GLYMA11G11791 I
GLYMA12G04050 Glycine max GLYMA12G04050 I
Gorai.001G243800 Gossypium raimondii Gorai.001G243800 I
Gorai.005G248900 Gossypium raimondii Gorai.005G248900 I
GRMZM2G428184 Zea mays GRMZM2G428184 N
GSMUA_Achr11G14990_001 Musa acuminata GSMUA_Achr11G14990_001 I
GSMUA_Achr1G08090_001 Musa acuminata GSMUA_Achr1G08090_001 N
GSMUA_Achr3G12290_001 Musa acuminata GSMUA_Achr3G12290_001 I
GSMUA_Achr5G25700_001 Musa acuminata GSMUA_Achr5G25700_001 I
GSMUA_AchrUn_randomG00680_001 Musa acuminata GSMUA_AchrUn_randomG00680_001 I
gw1.20.225.1 Physcomitrella patens gw1.20.225.1 I
Lus10012391.g Linum usitatissimum Lus10012391.g N
Lus10018061.g Linum usitatissimum Lus10018061.g I
Lus10042057.g Linum usitatissimum Lus10042057.g I
mgf000302m Mimulus guttatus mgf000302m I
mgf004912m Mimulus guttatus mgf004912m I
MLOC_10725 Hordeum vulgare MLOC_10725 N
MLOC_64362 Hordeum vulgare MLOC_64362 I
MLOC_75510 Hordeum vulgare MLOC_75510 I
MTR_1g023690 Medicago truncatula MTR_1g023690 N
MTR_4g072090 Medicago truncatula MTR_4g072090 I
orange1.1g007579m.g Citrus sinensis orange1.1g007579m.g I
Pavir.J19159 Panicum virgatum Pavir.J19159 N
Pavir.J29906 Panicum virgatum Pavir.J29906 N
PDK_20s1312701g003 Phoenix dactylifera PDK_20s1312701g003 I
PGSC0003DMG400001659 Solanum tuberosum PGSC0003DMG400001659 I
PK00843.1 Cannabis sativa PK00843.1 I
POPTR_0004s17080 Populus trichocarpa POPTR_0004s17080 I
POPTR_0009s12830 Populus trichocarpa POPTR_0009s12830 I
SapurV1A.0091s0130 Salix purpurea SapurV1A.0091s0130 I
SapurV1A.0379s0290 Salix purpurea SapurV1A.0379s0290 I
Sb01g048710 Sorghum bicolor Sb01g048710 N
Sb06g021350 Sorghum bicolor Sb06g021350 I
SELMODRAFT_129846 Selaginella moellendorffii SELMODRAFT_129846 I
SELMODRAFT_34663 Selaginella moellendorffii SELMODRAFT_34663 I
SELMODRAFT_77868 Selaginella moellendorffii SELMODRAFT_77868 I
Si035841m.g Setaria italica Si035841m.g N
Solyc01g110480.2 Solanum lycopersicum Solyc01g110480.2 I
TCM_006766 Theobroma cacao TCM_006766 I
Thhalv10024895m.g Eutrema salsugineum Thhalv10024895m.g I
Traes_2AL_FA1957F59 Triticum aestivum Traes_2AL_FA1957F59 I
Traes_7BS_7B68879A9 Triticum aestivum Traes_7BS_7B68879A9 I
Traes_7DS_3463CAE33 Triticum aestivum Traes_7DS_3463CAE33 I
TRIUR3_31242 Triticum urartu TRIUR3_31242 I
VIT_03s0038g00860 Vitis vinifera VIT_03s0038g00860 I