CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Da00516
(
Panicum virgatum
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Pavir.Da00516
T050724_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Da00516.1.p
bHLH
173
231
ATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSM
Pavir.Da00516.2.p
bHLH
173
231
ATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSM
Links
Other
bHLH
family TFs
Other
Panicum virgatum
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
e_gw1.6.920.1
Nectria haematococca
e_gw1.6.920.1
I
F503_07199
Ophiostoma piceae uamh
F503_07199
I
FGRRES_07198
Fusarium graminearum
FGRRES_07198
D
FOXG_01595
Fusarium oxysporum
FOXG_01595
I
FPSE_03183
Fusarium pseudograminearum
FPSE_03183
I
FVEG_07955
Fusarium verticillioides
FVEG_07955
I
HMPREF1624_04628
Sporothrix schenckii
HMPREF1624_04628
I
MAJ_08974
Metarhizium majus
MAJ_08974
I
MANI_121894
Metarhizium anisopliae
MANI_121894
I
MBR_06137
Metarhizium brunneum
MBR_06137
I
MGU_10045
Metarhizium guizhouense
MGU_10045
I
NechaG49195
Fusarium solani
NechaG49195
I
SPBR_05567
Sporothrix brasiliensis
SPBR_05567
I
TRIATDRAFT_233204
Trichoderma atroviride
TRIATDRAFT_233204
I
TRIREDRAFT_53877
Trichoderma reesei
TRIREDRAFT_53877
I
TRIVIDRAFT_188169
Trichoderma virens
TRIVIDRAFT_188169
I
UCREL1_367
Eutypa lata
UCREL1_367
I
VHEMI01120
Torrubiella hemipterigena
VHEMI01120
I
X797_010350
Metarhizium robertsii
X797_010350
I