CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J32610
(
Panicum virgatum
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Pavir.J32610
T050930_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J32610.1.p
bHLH
91
139
LKDHSEAERRRRERINAHLAALRRMILDARQMDKATLLARVVCQLKDLK
Links
Other
bHLH
family TFs
Other
Panicum virgatum
TFs
48 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_009_00280
Aquilegia coerulea
Aquca_009_00280
I
0.000
cassava38615.m1
Manihot esculenta
cassava38615.m1
N
0.000
Cla003934
Citrullus lanatus
Cla003934
N
0.000
Gorai.006G140200
Gossypium raimondii
Gorai.006G140200
I
0.000
Gorai.013G138300
Gossypium raimondii
Gorai.013G138300
I
0.000
GRMZM2G114873
Zea mays
GRMZM2G114873
I
0.000
GRMZM2G137426
Zea mays
GRMZM2G137426
N
0.000
POPTR_0013s11200
Populus trichocarpa
POPTR_0013s11200
N
0.000
POPTR_0019s10900
Populus trichocarpa
POPTR_0019s10900
N
0.000
TCM_036484
Theobroma cacao
TCM_036484
I
0.000