CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J34678
(
Panicum virgatum
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Pavir.J34678
T050935_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J34678.1.p
bHLH
79
130
RPTSKACRGKMRRDKLNDRFIELGSTLEHGKPVKADKAAILSDATRMVIQLR
Links
Other
bHLH
family TFs
Other
Panicum virgatum
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMXG00000011110
Astyanax mexicanus
ENSAMXG00000011110
N
ENSGACG00000019750
Gasterosteus aculeatus
ENSGACG00000019750
N
ENSONIG00000013505
Oreochromis niloticus
ENSONIG00000013505
N
ENSORLG00000005386
Oryzias latipes
ENSORLG00000005386
N
ENSPFOG00000006645
Poecilia formosa
ENSPFOG00000006645
N
ENSXMAG00000008639
Xiphophorus maculatus
ENSXMAG00000008639
N
prox1b
Danio rerio
ENSDARG00000088810
I