Thhalv10023982m.g (Eutrema salsugineum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Thhalv10023982m.g T051278_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BPE
M01700_2.00 		Arabidopsis thaliana
NCACGTNNN
NNNACGTGN		 PBM
Weirauch et al.(2014)
pTH7290 		0.866 0.941
BPE
M06726_2.00 		Arabidopsis thaliana
NNNNNNNNCACGTGNNNNNWB
VWNNNNNCACGTGNNNNNNNN		 Dap-seq
OMalley et al.(2016)
bHLH31_col 		0.866 0.941
BHLH78
M01713_2.00 		Arabidopsis thaliana
GCACGTGC
GCACGTGC		 PBM
Weirauch et al.(2014)
pTH7666 		0.853 0.824
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10023982m bHLH 37 87

Links

Other bHLH family TFs
Other Eutrema salsugineum TFs

260 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pc24g00840 Penicillium chrysogenum Pc24g00840 N
Pc24g01490 Penicillium chrysogenum Pc24g01490 N
PCH_Pc24g00840 Penicillium rubens PCH_Pc24g00840 N
PCH_Pc24g01490 Penicillium rubens PCH_Pc24g01490 N
PCH_Pc24g01720 Penicillium rubens PCH_Pc24g01720 N
U727_0042991001 Penicillium solitum U727_0042991001 N