CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LCUP010131
(
Lucilia cuprina
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
LCUP010131
T051464_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
cwo
M03623_2.00
Drosophila melanogaster
DRRTCACGTGAYYH
DRRTCACGTGAYYH
SELEX
Nitta et al.(2015)
cwo_1
0.914
1.000
cwo
M03624_2.00
Drosophila melanogaster
RKCACGTGMY
RKCACGTGMY
SELEX
Nitta et al.(2015)
cwo_2
0.914
1.000
cwo
M03625_2.00
Drosophila melanogaster
NDCACGTGHNNNDCACGTGHN
NDCACGTGHNNNDCACGTGHN
SELEX
Nitta et al.(2015)
cwo_3
0.914
1.000
cwo
M06001_2.00
Drosophila melanogaster
RTCACGTGACCR
YGGTCACGTGAY
B1H
Zhu et al.(2011)
cwo_SANGER_5_FBgn0259938
0.914
1.000
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LCUP010131-PA
bHLH
48
101
LSHRIIEKRRRDRMNSCLADLSRLIPPQYQRKGRGRIEKTEIIEMAIRHLKHLQ
Links
Other
bHLH
family TFs
Other
Lucilia cuprina
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AFUA_1G08770
Aspergillus fumigatus
CADAFUAG00006945
N
ANIA_05775
Aspergillus nidulans
CADANIAG00003279
N
CADANGAG00006322
Aspergillus niger
CADANGAG00006322
N
CGGC5_2205
Colletotrichum gloeosporioides
CGGC5_2205
I
FOXG_12744
Fusarium oxysporum
FOXG_12744
N
PAAG_00881
Paracoccidioides sp lutzii
PAAG_00881
N
Pc21g06560
Penicillium chrysogenum
Pc21g06560
N
PCH_Pc21g06560
Penicillium rubens
PCH_Pc21g06560
N
PDIP_41740
Penicillium digitatum
PDIP_41740
N
PGTG_11917
Puccinia graminis
PGTG_11917
N
PTT_04618
Pyrenophora teres
PTT_04618
N
PV09_07855
Verruconis gallopava
PV09_07855
N
S40288_10288
Stachybotrys chartarum
S40288_10288
I