CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMU15033026
(
Schmidtea mediterranea
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
SMU15033026
T051717_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AHR
M08716_2.00
Homo sapiens
DCACGCNMH
DKNGCGTGH
Misc
Kulakovskiy et al.(2013)
AHR_HUMAN.H11MO.0.B
0.844
0.804
Ahr
M08747_2.00
Mus musculus
DCACGCNMH
DKNGCGTGH
Misc
Kulakovskiy et al.(2013)
AHR_MOUSE.H11MO.0.B
0.844
0.804
AHR
M09816_2.00
Homo sapiens
WSTCACGCDASYYBGRRS
SYYCVRRSTHGCGTGASW
Transfac
Matys et al.(2006)
V$AHR_01
0.844
0.804
AHR
M09817_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AHR_Q5
0.844
0.804
AHR
M09818_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AHR_Q6_01
0.844
0.804
AHR
M09819_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AHR_Q6
0.844
0.804
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMU15033026
bHLH
37
82
PSKRHRERLNSELDHLASLLPFDQSVISKLDKLSILRLAVSYLRMK
Links
Other
bHLH
family TFs
Other
Schmidtea mediterranea
TFs
57 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R001040
Calypte anna
Aan_R001040
I
0.844
Afo_R003471
Aptenodytes forsteri
Afo_R003471
I
0.844
AHR
Sus scrofa
ENSSSCG00000030484
I
0.844
Ahr
Rattus norvegicus
ENSRNOG00000004342
I
0.844
AHR
Pan troglodytes
ENSPTRG00000018955
I
0.844
AHR
Oryctolagus cuniculus
ENSOCUG00000003877
I
0.844
Ahr
Mus musculus
ENSMUSG00000019256
D
0.844
AHR
Homo sapiens
ENSG00000106546
D
0.844
ahr1b
Gasterosteus aculeatus
ENSGACG00000015615
I
0.852
BGLB005801
Biomphalaria glabrata
BGLB005801
I
0.894
CapteG145851
Capitella teleta
CapteG145851
I
0.894
CGI_10012885
Crassostrea gigas
CGI_10012885
I
0.914
ENSAMEG00000010559
Ailuropoda melanoleuca
ENSAMEG00000010559
I
0.844
ENSAPLG00000008769
Anas platyrhynchos
ENSAPLG00000008769
I
0.844
ENSCAFG00000002448
Canis familiaris
ENSCAFG00000002448
I
0.844
ENSCJAG00000001029
Callithrix jacchus
ENSCJAG00000001029
I
0.844
ENSCPOG00000005481
Cavia porcellus
ENSCPOG00000005481
I
0.844
ENSCSAG00000013508
Chlorocebus sabaeus
ENSCSAG00000013508
I
0.844
ENSDNOG00000003198
Dasypus novemcinctus
ENSDNOG00000003198
I
ENSETEG00000019660
Echinops telfairi
ENSETEG00000019660
I
0.844
ENSGALG00000010836
Gallus gallus
ENSGALG00000010836
I
0.844
ENSGGOG00000011367
Gorilla gorilla
ENSGGOG00000011367
I
0.844
ENSLACG00000002803
Latimeria chalumnae
ENSLACG00000002803
I
0.844
ENSLAFG00000015328
Loxodonta africana
ENSLAFG00000015328
I
0.844
ENSMGAG00000010174
Meleagris gallopavo
ENSMGAG00000010174
I
0.844
ENSMLUG00000000097
Myotis lucifugus
ENSMLUG00000000097
I
0.844
ENSMMUG00000012203
Macaca mulatta
ENSMMUG00000012203
I
0.844
ENSMODG00000001528
Monodelphis domestica
ENSMODG00000001528
I
0.844
ENSMPUG00000013964
Mustela putorius furo
ENSMPUG00000013964
I
0.844
ENSOARG00000009234
Ovis aries
ENSOARG00000009234
I
0.844
ENSOGAG00000012656
Otolemur garnettii
ENSOGAG00000012656
I
ENSOPRG00000010358
Ochotona princeps
ENSOPRG00000010358
I
ENSP00000385642
Macaca fascicularis
ENSP00000385642
I
0.844
ENSPANG00000002444
Papio anubis
ENSPANG00000002444
I
0.844
ENSPCAG00000006894
Procavia capensis
ENSPCAG00000006894
I
0.844
ENSPPYG00000017758
Pongo abelii
ENSPPYG00000017758
I
0.844
ENSPSIG00000010051
Pelodiscus sinensis
ENSPSIG00000010051
I
0.844
ENSPVAG00000002167
Pteropus vampyrus
ENSPVAG00000002167
I
ENSSARG00000001961
Sorex araneus
ENSSARG00000001961
I
0.844
ENSSHAG00000001563
Sarcophilus harrisii
ENSSHAG00000001563
I
0.844
ENSSSCG00000015364
Sus scrofa
ENSSSCG00000015364
I
0.844
ENSSTOG00000003086
Ictidomys tridecemlineatus
ENSSTOG00000003086
I
0.844
ENSTBEG00000007210
Tupaia belangeri
ENSTBEG00000007210
I
0.844
ENSTGUG00000002585
Taeniopygia guttata
ENSTGUG00000002585
I
0.844
ENSTSYG00000010830
Tarsius syrichta
ENSTSYG00000010830
I
0.844
ENSTTRG00000006913
Tursiops truncatus
ENSTTRG00000006913
I
0.844
ENSVPAG00000008443
Vicugna pacos
ENSVPAG00000008443
I
0.844
Gfo_R002789
Geospiza fortis
Gfo_R002789
I
0.844
LotgiG117861
Lottia gigantea
LotgiG117861
I
0.890
Myotis_brandtii_AHR_10031750
Myotis brandtii
Myotis_brandtii_AHR_10031750
I
0.844
PXEA_0000742401
Protopolystoma xenopodis
PXEA_0000742401
I
0.868
SMU15013078
Schmidtea mediterranea
SMU15013078
I
0.914
SPU_005022
Strongylocentrotus purpuratus
SPU_005022
I
Tal_R011867
Tyto alba
Tal_R011867
I
0.844
XP_002161735.1
Hydra magnipapillata
XP_002161735.1
I