arntl.L (Xenopus laevis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 XB-GENE-17342306 T051777_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arntl
M01751_2.00 		Mus musculus
NCACGTGAYN
NRTCACGTGN		 PBM
Weirauch et al.(2014)
pTH5064 		0.914 1.000
ARNTL
M02787_2.00 		Homo sapiens
GTCACGTGAC
GTCACGTGAC		 SELEX
Jolma et al.(2013)
ARNTL_1 		0.914 1.000
ARNTL
M04124_2.00 		Homo sapiens
RDCACGTGHN
NDCACGTGHY		 SELEX
Yin et al.(2017)
ARNTL_eDBD_HT-SELEX 		0.914 1.000
ARNTL
M08725_2.00 		Homo sapiens
NVDCACGTGBN
NVCACGTGHBN		 Misc
Kulakovskiy et al.(2013)
BMAL1_HUMAN.H11MO.0.A 		0.914 1.000
Arntl
M08776_2.00 		Mus musculus
VCACGTGMN
NKCACGTGB		 Misc
Kulakovskiy et al.(2013)
BMAL1_MOUSE.H11MO.0.A 		0.914 1.000
Arntl
M09478_2.00 		Mus musculus
CACGTGNN
NNCACGTG		 Misc
Heinz et al.(2010)
Liver-Bmal1_GSE39860 		0.914 1.000
Arntl
M09889_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BMAL1_01 		0.914 1.000
ARNTL
M09841_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BMAL1_Q6 		0.914 1.000
ARNTL
M04125_2.00 		Homo sapiens
NDCACRTGHY
RDCAYGTGHN		 SELEX
Yin et al.(2017)
ARNTL_eDBD_Methyl-HT-SELEX 		0.914 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAH77551 bHLH 78 131

Links

Other bHLH family TFs
Other Xenopus laevis TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_019_00196 Aquilegia coerulea Aquca_019_00196 N 0.000
Bo3g040310 Brassica oleracea Bo3g040310 N 0.000
Bo4g071850 Brassica oleracea Bo4g071850 N 0.000
Bo4g165090 Brassica oleracea Bo4g165090 N 0.000
Bostr.27991s0112 Boechera stricta Bostr.27991s0112 N 0.000
Bra000495 Brassica rapa Bra000495 N 0.000
Bra011972 Brassica rapa Bra011972 N 0.000
Bra034392 Brassica rapa Bra034392 N 0.000
BRADI5G07720 Brachypodium distachyon BRADI5G07720 N 0.000
Cagra.12562s0002 Capsella grandiflora Cagra.12562s0002 N 0.000
Carubv10023654m.g Capsella rubella Carubv10023654m.g N 0.000
cassava28523.m1 Manihot esculenta cassava28523.m1 N 0.000
Ca_17453 Cicer arietinum Ca_17453 N 0.000
chr3.CM0070.320.nc Lotus japonicus chr3.CM0070.320.nc N 0.000
chr3.CM0396.580.nc Lotus japonicus chr3.CM0396.580.nc N 0.000
Ciclev10003738m.g Citrus clementina Ciclev10003738m.g N 0.000
Cla008847 Citrullus lanatus Cla008847 N 0.000
Cucsa.385700 Cucumis sativus Cucsa.385700 N 0.000
Eucgr.B03931 Eucalyptus grandis Eucgr.B03931 N 0.000
evm.TU.contig_28125.2 Carica papaya evm.TU.contig_28125.2 N 0.000
FIT Arabidopsis thaliana AT2G28160 N 0.000
FIT1 Vitis vinifera VIT_06s0061g00720 N 0.000
FIT1 Arabidopsis lyrata fgenesh2_kg.4__753__AT2G28160.1 N 0.000
FIT1 Populus trichocarpa POPTR_0009s01100 N 0.000
gene24607-v1.0-hybrid Fragaria vesca gene24607-v1.0-hybrid N 0.000
gene24608-v1.0-hybrid Fragaria vesca gene24608-v1.0-hybrid N 0.000
GLYMA11G19850 Glycine max GLYMA11G19850 N 0.000
GLYMA12G08640 Glycine max GLYMA12G08640 N 0.000
GLYMA12G30240 Glycine max GLYMA12G30240 N 0.000
GLYMA13G39650 Glycine max GLYMA13G39650 N 0.000
Gorai.009G090400 Gossypium raimondii Gorai.009G090400 N 0.000
GRMZM2G107672 Zea mays GRMZM2G107672 N 0.000
GRMZM2G173521 Zea mays GRMZM2G173521 N 0.000
GSMUA_Achr6G27600_001 Musa acuminata GSMUA_Achr6G27600_001 N 0.000
LPERR04G07210 Leersia perrieri LPERR04G07210 N 0.000
mgf022253m Mimulus guttatus mgf022253m N 0.000
mgf025442m Mimulus guttatus mgf025442m N 0.000
MLOC_6707 Hordeum vulgare MLOC_6707 N 0.000
MTR_2g084280 Medicago truncatula MTR_2g084280 N 0.000
OB04G17410 Oryza brachyantha OB04G17410 N 0.000
OBART04G10120 Oryza barthii OBART04G10120 N 0.000
OGLUM04G09730 Oryza glumaepatula OGLUM04G09730 N 0.000
OLONG_016577 Oryza longistaminata OLONG_016577 N 0.000
ONIVA04G07960 Oryza nivara ONIVA04G07960 N 0.000
OPUNC04G08160 Oryza punctata OPUNC04G08160 N 0.000
ORGLA02G0343900 Oryza glaberrima ORGLA02G0343900 N 0.000
ORGLA04G0072000 Oryza glaberrima ORGLA04G0072000 N 0.000
ORUFI04G11150 Oryza rufipogon ORUFI04G11150 N 0.000
OS04G0381700 Oryza sativa OS04G0381700 N 0.000
Pavir.Ga01979 Panicum virgatum Pavir.Ga01979 N 0.000
Pavir.J28741 Panicum virgatum Pavir.J28741 N 0.000
Pavir.J29678 Panicum virgatum Pavir.J29678 N 0.000
PDK_20s1479721g001 Phoenix dactylifera PDK_20s1479721g001 N 0.000
PGSC0003DMG400019017 Solanum tuberosum PGSC0003DMG400019017 N 0.000
PK26582.1 Cannabis sativa PK26582.1 N 0.000
Pm001154 Prunus mume Pm001154 N 0.000
PRUPE_ppa018718mg Prunus persica PRUPE_ppa018718mg N 0.000
SapurV1A.1382s0060 Salix purpurea SapurV1A.1382s0060 N 0.000
Sb06g012030 Sorghum bicolor Sb06g012030 N 0.000
Si010468m.g Setaria italica Si010468m.g N 0.000
Si010533m.g Setaria italica Si010533m.g N 0.000
Solyc06g051550.2 Solanum lycopersicum Solyc06g051550.2 N 0.000
TCM_041590 Theobroma cacao TCM_041590 N 0.000
Thhalv10016957m.g Eutrema salsugineum Thhalv10016957m.g N 0.000
Traes_2AL_088338613 Triticum aestivum Traes_2AL_088338613 N 0.000
Traes_2BL_F442E87DD Triticum aestivum Traes_2BL_F442E87DD N 0.000
Traes_2DL_47E8C44C6 Triticum aestivum Traes_2DL_47E8C44C6 N 0.000